Gene Slin_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0597 
Symbol 
ID8724325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp741831 
End bp743273 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385460 
Protein GI284035530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCGGG CGCATCGGAT AACTGTAAAA CAGGCCGAGT CCAAAGAATC CGTAATTCAG 
ACGAGTTATG CCGTAGTTCG GACCTGTTTT ATCCTGATTA ATCAGCCAAT TTTGCCTATC
CTTCGAACGA AGGTATTGAC AAAAAAAAAT GGCAACAACA TGCGCCGTTA CAGAACCTTA
CTCTTTGTTG TAGCCCTGGT GGTGATCAAT GCCCTGGGAC TGAGCCTTAC TCTGGTCAAT
AAGGGAAGTT ACAGAAACTC GCTTTATTAT CGCTTTACCC GGCAACGATT TGCCTGGATA
CTCAGTGCCC CCCGCCCTGC CTATCCCATT CAGGCAGGCT GGGCAAGCAT AGCCGTTAGT
CTGGCAGACG CATCTACGGC CGAAAAAACA CCTGACTCTA TTCGAACCCG GGCAATTGTC
CTTGATAATG GCACAACACG GGCGGCTATC CTATCCGTCG ATTTACCAAT AATGCCTCCC
TCCGTTGCTC AGGCATTGGA ACAGAAGCTG CCTAAGCTCG GCTTCGCCTG GAAAAATGTG
TATCTGGGGG CTACGTATTC CCAACCGGGG CTGGGTAGCT GGACCGACGA TTATATGGCG
AAACGAAAAT CCGGACCCTA CAACCAGCAA TGGGTCGATC AATTGACAGC GGCTATTCTC
AAAGCGGTAA GTTTGGCTCA AAGCCAGATG GCAACTGTCC AGCTTGGTTA CACGCAGGCC
GATCAGAACG GTCAGGAACA GCGCACCACC GACCGCCGTC AGGTGCTCTA TCTCCTTCTG
TTTCGCAAGC CAACCGGCGA ATCGGCTCTG GTTTTTACGG CGCCCGTCCG TTCAATACCG
GAGGGCGAAA CCGCTAACGC CCCTGATCCG TCTGGCGGTC TTAAGGCGTT GACTAAACAG
CTTGAAAAAC AAACGCACTC GTTTATCCTG GCTCTGGCCG GATCGATTGA CGATACCGGG
CGTTCTAATC AACAGACTAG CAGAAACGCA CAGGCCTTAG CGGCTCGTCT GGCCACTCTA
CTGGCCCGGC AGCCACTGCA TACCGACAGT ACGCTGATAG CTCAAACAGC CCCGCTCATC
CAGAATGACC CCCAAATCCG GATCAGTCAA AACTGGCGGC TTAAACCCTG GCTAGCCAAA
GCCCTTTACG GAGACTACCC CGCCGAGTTA AAAGCCTTAC GCATTGGCCA AACTGTTTTT
GTGGGTTGTC CGGGTGGTGT TTCAACAGAA TTAACCGGCG ATTTGCTGGC CTTACCGGCA
GCGGATCGGT GGCCCCTGGT TATCACCAGC TACAACGGGG GCAACCTGGG AAGAATCGTC
CCCGACGCCT ATTATTACGC TGAAAACAGC CCTTATACGA TTAGTCAAAC TAACCGATTT
GGCCCGCATA CCGCCCAATT TTTCGAAGAT ATGACCCAAA GCCTGGTCAG CAGCTTGAAA
TAG
 
Protein sequence
MFRAHRITVK QAESKESVIQ TSYAVVRTCF ILINQPILPI LRTKVLTKKN GNNMRRYRTL 
LFVVALVVIN ALGLSLTLVN KGSYRNSLYY RFTRQRFAWI LSAPRPAYPI QAGWASIAVS
LADASTAEKT PDSIRTRAIV LDNGTTRAAI LSVDLPIMPP SVAQALEQKL PKLGFAWKNV
YLGATYSQPG LGSWTDDYMA KRKSGPYNQQ WVDQLTAAIL KAVSLAQSQM ATVQLGYTQA
DQNGQEQRTT DRRQVLYLLL FRKPTGESAL VFTAPVRSIP EGETANAPDP SGGLKALTKQ
LEKQTHSFIL ALAGSIDDTG RSNQQTSRNA QALAARLATL LARQPLHTDS TLIAQTAPLI
QNDPQIRISQ NWRLKPWLAK ALYGDYPAEL KALRIGQTVF VGCPGGVSTE LTGDLLALPA
ADRWPLVITS YNGGNLGRIV PDAYYYAENS PYTISQTNRF GPHTAQFFED MTQSLVSSLK