Gene Slin_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0596 
Symbol 
ID8724324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp740475 
End bp741596 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385459 
Protein GI284035529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAA TCGCATTAAC CGGCCTTCTG CTCCTGCACG GGCTTATTCA TGTATTGGGC 
TTTATCAACC TGAGGTGGCT GACCAGGGTA GCTCCCCTCC AAAGACAAAC GCTGATCCCG
GTATCGGAAA ACATTTCTAA ACTACTGGGG CTGGGTTGGC TGCTGGCCTG CTTTGGTTTT
GTCATCGCAC TGATCGGCTA CTGGGTGCAG CGCGACGGAT GGATAACGCT TACCCTGATT
AGTGTCGCGC TCTCGCAGCT CCTGATTATT GTTTACTGGC CCGAAGCCAA AGCAGGAACG
CTGGTCAATG AGCTTATTGC GCTGGCGCTG CTACTAACTT ATGCCCGGCT TCGGTTCGAC
CAGCGCGCAG ACAGCGAAGC CCGTCAATTA CTCTGGCAGG CCAGGTCGAG TCGTACCATT
ATAACAGCCG ACAGCCTGAA GGACCTGCCC TTACCCGTTC GGCAGTGGCT GACAGCATCG
GGGGTGGTCG GTAAAGAGCC AATAACCACC GTCCGGCTCC GGCAGCAGGG GCTGATGCGT
ACCAGTCCCG ACGGCGCCTG GATGCCTACG CAAGCCCGGC AGTATTTCAG CATTGACCCA
CCGGGTTTTG TTTGGAAAGC CAATGTGCAG ATGCGGTCGT TTCTGCCGTT GGCAGGTCGC
GATAAATACA CCGGGGGCAA GGGTAATATG CTCATTAAAG CCCTGTCGCT TGTGCCCGTG
GTGGATGCCG CCGACGCCAA AACCGATCAG GGCAGCCTGC TTCGGTTTTT AGGAGAGATG
TGCTGGTTCC CCTCAGCCGC CCTGAGTTCT TACCTGTCGT GGCGGGCAAT CGACGCAACG
CAGGCGGAAG CCACGATGCA GTATGCAGGT GTAACGGCTA AAGCCGTGTT TGCCTTCGAT
GCCCAACACC GGCTTACCTG TGTAACGGCC CGACGCTACA TGGGCGGAGG GCAGGCAGGC
AAACTGGAAA CCTGGTATAT CCCGTGCAAG GCCTGGAAGA CTTTCCAAGG GATAACCATC
CCGGTGGCCG GGGACGTGAT CTGGAAATTA CCCGCGGGTG ACTTCACCTA TTACCAGTGG
AAAATCCTGA GTATCGACTA TAACAAGCCA GCCTTGTATT GA
 
Protein sequence
MFRIALTGLL LLHGLIHVLG FINLRWLTRV APLQRQTLIP VSENISKLLG LGWLLACFGF 
VIALIGYWVQ RDGWITLTLI SVALSQLLII VYWPEAKAGT LVNELIALAL LLTYARLRFD
QRADSEARQL LWQARSSRTI ITADSLKDLP LPVRQWLTAS GVVGKEPITT VRLRQQGLMR
TSPDGAWMPT QARQYFSIDP PGFVWKANVQ MRSFLPLAGR DKYTGGKGNM LIKALSLVPV
VDAADAKTDQ GSLLRFLGEM CWFPSAALSS YLSWRAIDAT QAEATMQYAG VTAKAVFAFD
AQHRLTCVTA RRYMGGGQAG KLETWYIPCK AWKTFQGITI PVAGDVIWKL PAGDFTYYQW
KILSIDYNKP ALY