Gene Slin_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0564 
Symbol 
ID8724292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp692382 
End bp693077 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID 
ProductProtein of unknown function DUF2086 
Protein accessionYP_003385427 
Protein GI284035497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCA CTACCGTTCA CTGGCCCACT CATCAGCAAA CCCTGACCGA AACGGGTTTT 
GCGCTGTTAC CCTCACTCCT AACGGCCGAT GAATGCCGGC AAATGGCTGC ACTCTATGAC
TCACCGGTAT TGTATCGTAA AACAATTGTG ATGCAGAATC ATGGCTACGG GAGTGGCGAA
TACAAATACT TCACGTATCC ATTGCCCCCG GCTATCGACA CCCTTAGGCA TGATTTATTT
ACGCAACTGG CGCCAGTTGC CAACGACTGG AACGCAAAGC TCAATCTTTC GCAACGCTAC
CCGACCACGC TCGATGAATG GCTCGCCATC TGTCACGAAG CCGGACAAAC TCGACCCACA
CCCCTCATCC TCAAGTACCG TACCGGCGGC TGGAATGCGC TCCATCAGGA CATGTACGGC
GAGTTATATT TTCCGTTTCA GGCTGTTTTA TTCCTGAATC AGCCGGGAGA GGAGTATACA
GGGGGCGAAT TTATTATGCT TGAGCAGCGG CCCCGGATGC AGTCCAAAGT AACCGTTTTG
CAACCGAAAC AAGGGCAGAT TCTGCTGTTC ACGACCAAAT TCAGACCCGC AAAAGGGGCG
CGCGGCTATT ACCGGGTCAC GATGCGGCAT GGTGTCAGCG AAGTAAGGCA GGGTAACCGC
ATGACTGTAG GGTTGATTTT TCATGATGCG GCATGA
 
Protein sequence
MTITTVHWPT HQQTLTETGF ALLPSLLTAD ECRQMAALYD SPVLYRKTIV MQNHGYGSGE 
YKYFTYPLPP AIDTLRHDLF TQLAPVANDW NAKLNLSQRY PTTLDEWLAI CHEAGQTRPT
PLILKYRTGG WNALHQDMYG ELYFPFQAVL FLNQPGEEYT GGEFIMLEQR PRMQSKVTVL
QPKQGQILLF TTKFRPAKGA RGYYRVTMRH GVSEVRQGNR MTVGLIFHDA A