| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0554 |
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| Symbol | |
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| ID | 8724282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 684362 |
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| End bp | 686110 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003385417 |
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| Protein GI | 284035487 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.674726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACCC CCTTTGCCAT GAATCGACTT TATAACGTAT GTGTGCTGCT GGGGCTGATG
CTGGTGTCAG TGGCTTGTAC CGAGAATTTA CTCGACCAGA TCCCCACGAC GCAACTGTCG
GCAGAACTGT TCTGGAAGAC AACGGCCGAT GCCACGGCGG CTGTTAACGG CGTCTATGAA
GCCAACCGGA CTACCTTCGA CCGGGATTAC TATTTCGACG GGGCCGGTGA ATTTGTCAAT
ACCCGTGGGA CCAGCAACAA CCAGGGCACA TTTAACCCCA GTGGTCTGGG CTCCAACGGT
AATTTTGGAT TTCTGTGGGG CGATTGTTAC CGGGCTATCA ACCGCGCCAA CTATGTGCTG
GGCAATATTG GTACCCTGCG ATCGACGCTC AACCAGCCCG CCGATCTGGC CCTGATGGAT
CGGCTGGTGG CCGAAACCCG CTTTCTGCGT GCCATCAACT ACTTCCGACT GATCGACCTG
TGGGGCGATG TGCCTTACTT TACCAGAAAA CTGGACGGTA ATGCCGAAGC GTATGGCCTT
TCCCGAACGC CCCGCGCCGT TGTTAAGGAT TCTATCCTGG CCGACCTGAG TTTTGCGGCA
ACGATTCTAC CCGAAGTTTA TGCGGGCGAC AATCTGGGTC GGGCCTCCCG GCTGGCGGCT
CTGGCTTTCA GCGGTAAAGT GAACCTGTTC TGGGCCAGCT GGATGAAAAA CGAAGGTAAC
AGCGCCGAAG CACAGAAGCA TTTTGCGGCA GCAGCGGCTG ACTTCAAAAA GATTGTCGAC
AAAAATATTC CGCTGTTTCG TAATGGTGAG CCGGGGCCGT CCGATAATCC CAACTACTGG
CATCTGTTTC AGTACTTCAA CGAGTATGAC CCCGAAATCA TTTTTTCCGT ACAGTTTGGC
GGGCCGCTGC TGAGCCAGGG CGAGGAACTG TCGCGCGATT TCGGTAACCG AAATACCGGT
TTCGGTCAGT GCTGGGTTGC GCCCACGTTC CGCTTAGCCA ACCGGTATCA ACTGGTGAGC
ACCGGCGATT TCGCGCCCCC ACTCGTACTG AGCCGCACCA CGACGCTGCT CAACAGCGCC
ACCAACCCAA AATCGTACGA AGGACGCGAC TACCGGATGC GGGCCACAAT GGTGTGGGAC
GGCCAGAAAA TGGTGCAGCT GTCGACCGAC GGCTTAACGG TACTGCCCGA TAGCCTGCCC
TTCCGCTTTG GTAACCGCGA CGGGGTAACG GCCCTTAACT ATGACGGACA AACGTCCGGC
TACATGTTTC GCAAATGGGT GCGACAGACG GGCGGTATCG GCCGGAGCGA TGGCCCGCAG
GACATCTACC TGATGCGCCT GCCCGATGTG TGGCTCATGT ATGCCGAGGC TGTTAACGAA
GTCAACGGCG GCCCCACGCC CGAACTCTTC ACCCTGCTGA ACCGCATTCG TCGCAGGGGT
AACCTGCCTG CCCTCAACAC GGCGAAGTTT TCGACCCAGG CCGAATTTTT CAAAGCCATC
GAGCAGGAGC GGATCATTGA ACTGGTGGGC GAAGGGCAGC GCTTCTTCGA CATTCGTCGC
TGGAAAAAGG CCGAAGAAAT CTGGCCCGCT CCATCCGGGC AGGTGCTCTT CGACACCCAG
GGCACCCGCG TCCGCGATGA GTTTGTCAAT GCCGATCTGC GCGCCTACCA GCGGTATTAT
ATTTTTCAGA TTCCGCCCGC CGAGATCGAA GTAAATGCCA AAATAACCCA AAACGCACCC
TGGTTATAA
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| Protein sequence | MYTPFAMNRL YNVCVLLGLM LVSVACTENL LDQIPTTQLS AELFWKTTAD ATAAVNGVYE
ANRTTFDRDY YFDGAGEFVN TRGTSNNQGT FNPSGLGSNG NFGFLWGDCY RAINRANYVL
GNIGTLRSTL NQPADLALMD RLVAETRFLR AINYFRLIDL WGDVPYFTRK LDGNAEAYGL
SRTPRAVVKD SILADLSFAA TILPEVYAGD NLGRASRLAA LAFSGKVNLF WASWMKNEGN
SAEAQKHFAA AAADFKKIVD KNIPLFRNGE PGPSDNPNYW HLFQYFNEYD PEIIFSVQFG
GPLLSQGEEL SRDFGNRNTG FGQCWVAPTF RLANRYQLVS TGDFAPPLVL SRTTTLLNSA
TNPKSYEGRD YRMRATMVWD GQKMVQLSTD GLTVLPDSLP FRFGNRDGVT ALNYDGQTSG
YMFRKWVRQT GGIGRSDGPQ DIYLMRLPDV WLMYAEAVNE VNGGPTPELF TLLNRIRRRG
NLPALNTAKF STQAEFFKAI EQERIIELVG EGQRFFDIRR WKKAEEIWPA PSGQVLFDTQ
GTRVRDEFVN ADLRAYQRYY IFQIPPAEIE VNAKITQNAP WL
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