| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0553 |
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| Symbol | |
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| ID | 8724281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 681252 |
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| End bp | 684362 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003385416 |
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| Protein GI | 284035486 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAACT ATTTACTCAA TAGGCTTCAA CAGTCGATAC CCTACTGTTG GTTAGCTCTG
CTGTTGACGA TCGGCATTGC CAACGGGCAG ACAACCACTT ACTCGTTTAG CGGGCGGGTA
CTGGATGAGA AAAATACGGG CCTCCCCGGC GCTACGGTCG TCCTGAAAAA CAATAACAAG
ACGGGCACTA CCACCGACGC CAACGGTAAG TTCACGATCA GCATGCCCAC GGGCGGTGGC
ACACTGGTGG TATCGGCCAT TGGTTACCTG GCCAAAGAAG TTGCCGTTAC GAGCGAAACC
ACCATCGACG TACCGATGGC TCCCGACGTA AAGACGCTCA ACGAAGTGGT GGTAGTTGGT
TACGGAACTC AAAAGAAGGA AAACCTGACA GGGGCCGTGG CGGCCATTAC CATCGATGAT
AAAATATCGA GCAGGTCGCT GTCAAACGTC TCCTCGGCGC TGTCGGGCCT GATTCCGGGT
CTGGCCGTTC AGCAGTCGAC GGGGCAGGCG GGGCGCAGCG GGGCCGCGCT AGTGATCCGG
GGGCTGGGAA CGGTCAATAA CTCGGGGCCG CTGATTGTCG TAGATGGTAT TCCCGATGTC
GACATCAACC GGATCGACAT GAACGACGTT GCCAGTATCT CCGTCCTGAA AGATGCGGCC
TCGGCTTCCG TTTACGGGTC AAGGGCAGCT AACGGCGTTG TGTTGATCAC CACCAAAAAC
GGCTCGCAGA ACAAGAAACC GGTCATCAGT TACACGGGCA CGTACGGCCT TTCAGAACCG
ACCAATTTCT ATAACTACTT CGATGACTAC GCCCGTTCGC TTACCATGCA CCTGCGGGCC
TCGGGGGCGG GGGCATCGTC GACCACCTTC CGGTATGGCA CCGTGGAGGA CTGGCTGTCG
AAGAGCATGA TCGACCCGAT CAAATACCCC AGCACCAACT GGTGGGATGT GGTGCTGCGC
GATAAGGGCC GGATTCAGAC ACATAACCTG TCGGCAGCGG GTGGCAATGA GCGTTCCAAT
TTTTACCTGT CGGCGGGGAT ATATGATGAG TTGGGTATCC TGATCAATCA CGATTACAAG
CGATACAACA CCCGATTTAA CCTGGACTAC AAACTGAGCG ACCATATTAA AGTCGGCATT
CGGATGGATG GACAATGGTC GAAGCAGACC TACGCCAACT CCGAAGGGCT GATTACCTAT
ACCGGAACCG GGGGCTACGA CATTCGCTAT GCCGTGGCCG GTATTCTGCC GCAAAACCCG
CTTACTGGTC AGTATGGGGG TGCAATGGCC TATGGCGAAG ATGCCCTGGC GTATAATATG
CTGGCGGCCA TGAACGTCAA CCATAACCTA CGCGACCGCC AGGAAGCCAA CGGTAATTTA
TACGGCGAGT GGACGCCCAT CACGGGCTTG ACCATCCGCG GTGATTATGG CCTGCGGTAT
TACAATCAAT TTACAAAAAG CTACGCCGAC CCCTCGGATG TCTTTAACTT CCAGACGAAC
CAGATTTCAC GCAATCTCGT ATCCAGCAGC GCTGGTATTA GCAACGCCAT CAATTCGGGC
TATAAAACGC TGCTTCAGGG CCGGGTAACG TACAACAAAA CGCTCTTCGG CAACCATCAG
CTGAGTCTGT TGGGGGCTTA TACGGAAGAA TACTGGTTCA ACCGAAACCT GTCGGCCAGT
CGCCTGGAGC GCATCAACCC GCTCCTGAGT GAAATCGACG CGGCTCTTAC CACGACGCAG
GCTGCCGGGG GTAACTCCGA CGCCGAAGGG TTGCGGTCGG GCATCGGTCG ACTCAATTAC
GTCGTCAACG ATAAATACCT GTTTGAAGTG AACGCCCGCT ACGATGGGTC CAGCAAGTTT
CTGCCGGGAT TTCAGTACGG CTTTTTTCCG TCGGCATCGG CAGGCTGGCG TTTCTCGGAA
GAGCCTTTCT TCAAGCGGTT CAGTTCCGTG GTATCGTCGG GTAAAGTCCG GGCTTCCATT
GGTAAGCTGG GCAACAACTC GGGCGTGGGG CGGTACGAAC AGCGCGATAT TTTCAACCTG
ACCAATTATA TCCTGAACGG GAAAATCACC AAAGGCTTTA GTTCGGCCAA AATTATCAAC
GAGGATTTCT CCTGGGAAGA AACCAACGTA ACCAACCTTG GGCTGGACCT GGCTTTCTTC
GGCGGTCGCC TGACAACCGA TATTGATTAC TACAACAAGC TGACTTCCGG GATGATCCGC
CCGTCGTCGC TGTCGACTTT CCTGACCGGC TACAACGCCC CGCGTGTGAA CATCGGCAAG
CTCCGGAATA CGGGTGTAGA AGTCAATGTC ACCTACCGGG CCAAGGTTCG TGATGCTAAC
GTTGGAGCAA CGCTCAACAT GGCCTTTAAC CAAAATAAAC TGCTGGAGTG GAATGAGTTT
CTGAGCAAAG GGTACACCTA CCTGAACCTG CCTTATCACT TCGCTTACAG CCGCGTGGCC
ACGGGCATTG CCCAGAGCTG GGAGGATATT GCCAACGCAC CCTATCAGGG ACAGTACTTT
TCGCCGGGCG ATATTCTGTA TAAAGACCTC AATGGCGACG GTCAGGTGAA CGACGAAGAC
CGTAAAGCCG AACCCAAATT TAACCGGGAT CAGCCTACGG GTACCTACGG CCTCAATCTG
TTTGCCAACT GGCGGGGTTT CGATGTCAGC GTACTCTGGC AGGCTGCCAC CGGCCGGAAA
GATTTCTGGC TGGAGCCGTT CAACAACGTC AACATTCCGG CCGCACGCAA CGCCTTTCAG
GACTTTTTAT GGAACGATAC CTGGAGCCTC GACAACCGGC TGGCGTCGCT GCCCCGGCTT
GTTACGGGTT CGGGTGGTAA CAACCAGGCC GAATCGACCT TCTGGCTCGA CAACTTTGGT
TACCTGCGGC TTAAGAATAT TCAGTTGGGC TACAACATTC CCACCAAATA TATCAGCCGG
TTGGGATTGA GTAAGGTCCG TATCTACGGA ACATCCGAAA ACCTGCTGAC CTTCACAAAA
TACCGCGGTG TCGACCCGGA AAAGAGCACG AGTGTGTCGG GAGCCGATAA TAATGACGAC
CCGTTTCCGC TGCTCAAATC CTATTCGTTC GGTCTTAACC TCAGCTTTTA A
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| Protein sequence | MPNYLLNRLQ QSIPYCWLAL LLTIGIANGQ TTTYSFSGRV LDEKNTGLPG ATVVLKNNNK
TGTTTDANGK FTISMPTGGG TLVVSAIGYL AKEVAVTSET TIDVPMAPDV KTLNEVVVVG
YGTQKKENLT GAVAAITIDD KISSRSLSNV SSALSGLIPG LAVQQSTGQA GRSGAALVIR
GLGTVNNSGP LIVVDGIPDV DINRIDMNDV ASISVLKDAA SASVYGSRAA NGVVLITTKN
GSQNKKPVIS YTGTYGLSEP TNFYNYFDDY ARSLTMHLRA SGAGASSTTF RYGTVEDWLS
KSMIDPIKYP STNWWDVVLR DKGRIQTHNL SAAGGNERSN FYLSAGIYDE LGILINHDYK
RYNTRFNLDY KLSDHIKVGI RMDGQWSKQT YANSEGLITY TGTGGYDIRY AVAGILPQNP
LTGQYGGAMA YGEDALAYNM LAAMNVNHNL RDRQEANGNL YGEWTPITGL TIRGDYGLRY
YNQFTKSYAD PSDVFNFQTN QISRNLVSSS AGISNAINSG YKTLLQGRVT YNKTLFGNHQ
LSLLGAYTEE YWFNRNLSAS RLERINPLLS EIDAALTTTQ AAGGNSDAEG LRSGIGRLNY
VVNDKYLFEV NARYDGSSKF LPGFQYGFFP SASAGWRFSE EPFFKRFSSV VSSGKVRASI
GKLGNNSGVG RYEQRDIFNL TNYILNGKIT KGFSSAKIIN EDFSWEETNV TNLGLDLAFF
GGRLTTDIDY YNKLTSGMIR PSSLSTFLTG YNAPRVNIGK LRNTGVEVNV TYRAKVRDAN
VGATLNMAFN QNKLLEWNEF LSKGYTYLNL PYHFAYSRVA TGIAQSWEDI ANAPYQGQYF
SPGDILYKDL NGDGQVNDED RKAEPKFNRD QPTGTYGLNL FANWRGFDVS VLWQAATGRK
DFWLEPFNNV NIPAARNAFQ DFLWNDTWSL DNRLASLPRL VTGSGGNNQA ESTFWLDNFG
YLRLKNIQLG YNIPTKYISR LGLSKVRIYG TSENLLTFTK YRGVDPEKST SVSGADNNDD
PFPLLKSYSF GLNLSF
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