Gene Slin_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0548 
Symbol 
ID8724276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp673418 
End bp673909 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content52% 
IMG OID 
ProductOsmC family protein 
Protein accessionYP_003385411 
Protein GI284035481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.474457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.130238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG AACACCACTA TGCACTAACC GTTACCTGGG ACGGCAACAC CGGGCAAGGA 
ACCAGCACCT ATCGATCCTA CGAGCGAAGC CATGTTATCT CAGCAGGAAC GAAGTCTGTG
ATCATGGGCT CGTCTGATCC GGCCTTTCGG GGAGACAAAA CCAGATACAA CCCCGAAGAA
CTATTGGTTG CCTCGCTGTC GAGCTGCCAC ATGCTCTCAT ACCTGCACCT CTGCGCTGTA
GCGGGGGTTG TGGTGACCGA CTATGTAGAC AACGCCAGTG GCATTATGGT CGAAACAGCG
GACGGGGGCG GGCACTTCAG CGAAGTTACG CTCAATCCCG TTGTTACGGT TACCGAGCAA
TCTATGATCG ACAAAGCCAA TGAACTACAT GAACAGGCCA ACAGGGTATG TTTCATCGCA
AACTCCTGCA ATTTCCCGGT CTATCATAAA CCGTCGTGTC TGGTAAATAA GGATGTTGAG
AAAACAGGTT AG
 
Protein sequence
MAKEHHYALT VTWDGNTGQG TSTYRSYERS HVISAGTKSV IMGSSDPAFR GDKTRYNPEE 
LLVASLSSCH MLSYLHLCAV AGVVVTDYVD NASGIMVETA DGGGHFSEVT LNPVVTVTEQ
SMIDKANELH EQANRVCFIA NSCNFPVYHK PSCLVNKDVE KTG