Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0548 |
Symbol | |
ID | 8724276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 673418 |
End bp | 673909 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | OsmC family protein |
Protein accession | YP_003385411 |
Protein GI | 284035481 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.474457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.130238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAAG AACACCACTA TGCACTAACC GTTACCTGGG ACGGCAACAC CGGGCAAGGA ACCAGCACCT ATCGATCCTA CGAGCGAAGC CATGTTATCT CAGCAGGAAC GAAGTCTGTG ATCATGGGCT CGTCTGATCC GGCCTTTCGG GGAGACAAAA CCAGATACAA CCCCGAAGAA CTATTGGTTG CCTCGCTGTC GAGCTGCCAC ATGCTCTCAT ACCTGCACCT CTGCGCTGTA GCGGGGGTTG TGGTGACCGA CTATGTAGAC AACGCCAGTG GCATTATGGT CGAAACAGCG GACGGGGGCG GGCACTTCAG CGAAGTTACG CTCAATCCCG TTGTTACGGT TACCGAGCAA TCTATGATCG ACAAAGCCAA TGAACTACAT GAACAGGCCA ACAGGGTATG TTTCATCGCA AACTCCTGCA ATTTCCCGGT CTATCATAAA CCGTCGTGTC TGGTAAATAA GGATGTTGAG AAAACAGGTT AG
|
Protein sequence | MAKEHHYALT VTWDGNTGQG TSTYRSYERS HVISAGTKSV IMGSSDPAFR GDKTRYNPEE LLVASLSSCH MLSYLHLCAV AGVVVTDYVD NASGIMVETA DGGGHFSEVT LNPVVTVTEQ SMIDKANELH EQANRVCFIA NSCNFPVYHK PSCLVNKDVE KTG
|
| |