| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0546 |
|---|
| Symbol | |
|---|
| ID | 8724274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 671566 |
|---|
| End bp | 672531 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_003385409 |
|---|
| Protein GI | 284035479 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.548206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.141475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TACTGATCGT TTTTATTCTG GCGCTGGTCG TTATCTACCT CTCTGTTGTC
ATTGTACAGC AGGGTACTGT TGCCGTCATT ACCGTATTTG GGAAGTACGC TCGTGTGCTT
CGGCCGGGGC TAAACTTTAA AATTCCATTT ATCGAAGTTA TTTACCGCCG TATCTCAATC
CAGAATCGCT CCGTCGAACT GGCGTTTCAG GCCATTACCG CCGATCAGGC CAATGTCAAT
TTCAAAGCCA TGCTGGTGTA TTCGGTCCTG AATCAGGAAG AAGAAACTGT TAAAAATGTG
GCCTTTAAGT TCATCGACGA AGCCTCCTTC ATGCAGGCAC TGATTCGAAC CATCGAAGGC
TCCATCCGGA GCTTTGTGGC TACCAAACGA CAGTCGGAGA TTTTGGCGCT ACGCTCCGAA
ATTATCGAGC ACGTAAAATC GCAGCTTGAC ACCCTGCTCG AAAGCTGGGG CTATCACCTC
ACCGATCTAC AGCTCAACGA CATTGCATTC GATGAGGTCA TTATGCGGTC GATGGCGCAG
GTCGTAGCGT CATCGAACCT GAAAGCAGCC GCCGAAAACG AAGGTCAGGC GTTGCTCATC
ACGAAAACCA AAGCTGCCGA AGCAGAAGGA AATGCCATTC AGATTTCGGC TGAAGCCGAG
AAAAAAGCGT CGCAGTTACG CGGTCAGGGG GTGGCTCTTT TCCGGGAGGA GGTTGCCAAG
GGTATGGCCG AATCAGCCAA AGTAATGACA GAGGCCAAGC TGGATGCTTC GCTGATTCTG
TTCTCGATCT GGACGGAGGC CATCAAGCAT TTTGCCGAGA ATGGGCGGGG CAACGTTATT
TTCCTGGATG GCTCAACCGA TGGGATGGAG AAAACGATGA AGCAGTTGCT GGCTGTTCAA
ACCCTGAACA GTGGTATCGA ATCGAGTGGT ATCATCGCAC CACCACCTGT ATCTGGTAGA
CAATAG
|
|---|
| Protein sequence | MNFLLIVFIL ALVVIYLSVV IVQQGTVAVI TVFGKYARVL RPGLNFKIPF IEVIYRRISI
QNRSVELAFQ AITADQANVN FKAMLVYSVL NQEEETVKNV AFKFIDEASF MQALIRTIEG
SIRSFVATKR QSEILALRSE IIEHVKSQLD TLLESWGYHL TDLQLNDIAF DEVIMRSMAQ
VVASSNLKAA AENEGQALLI TKTKAAEAEG NAIQISAEAE KKASQLRGQG VALFREEVAK
GMAESAKVMT EAKLDASLIL FSIWTEAIKH FAENGRGNVI FLDGSTDGME KTMKQLLAVQ
TLNSGIESSG IIAPPPVSGR Q
|
|---|
| |