Gene Slin_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0540 
Symbol 
ID8724268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp662075 
End bp662941 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content48% 
IMG OID 
Productfatty acid hydroxylase 
Protein accessionYP_003385403 
Protein GI284035473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATGG AGCGGTTAGT TGATTATTTC GAACACATAC CATCGTCACA CCGGGCGTTG 
ATTTTGGTTG GGGGAATTGC CCTGTTCTGG CTTATCGAAA ATGCGTTGCC TCTGTTTTCG
TTTCCTTACC GAAAAGTGCA ACACGCAGGC ATCAACCTAT TCTTTACGCT AACCACTATT
ATTGTCAATT TTGCGCTGGC TTTTATTCTG CTTAAAAGCA GTGATTGGGC GGTCAGCCAT
CACATTGGTC TTTTACAATG GGTTCAATTG CCGCTTTGGG CCGAAGCTAT CGTTGGGTTG
CTGGTTCTTG ATCTGGTAGG GGCCTGGCTG GCTCACTGGA CCGAACATAA AGTCACTTTC
CTGTGGCGCT TTCACCTCAT TCATCACACA GATACCTACG TCGATACAAC CACCGCCAAC
CGGCACCACC CCGGCGAAAG TGTTATTCGC TTTGCCTTCA CAACGCTGGC GGTGTTGATT
ACAGGAGCAC CTATGTGGTT GGTTTTCCTG TACCAGGCGT TGTCGGTCGT GCTTTCGCAG
TTCAATCACG CCAACATCGA ACTTCCCCGC TGGGCCGACC GAATTTTGGG TCTGCTTATT
GTAACGCCTA ATATGCACCA CGTACACCAT CATTATGTGT TGCCGGTGAC CAATACGAAT
TATGGTAATA TCTTCCCATA CTGGGACCGG ATCTTCGGTA CTTATCATGA AATGCCGGGC
AAAGCCATTC ACTACGGCAT TGATACGCAT ACCGAAACGC ACGAACACAC GCATATTGGC
AATCTGCTTA AAATACCGTT CCAGAAGTAC CGTCCGCCAG TGGGTGAAAA GGTAGATGTG
TCCGAAAAAA CGCTCCTGAA TAGCTAA
 
Protein sequence
MSMERLVDYF EHIPSSHRAL ILVGGIALFW LIENALPLFS FPYRKVQHAG INLFFTLTTI 
IVNFALAFIL LKSSDWAVSH HIGLLQWVQL PLWAEAIVGL LVLDLVGAWL AHWTEHKVTF
LWRFHLIHHT DTYVDTTTAN RHHPGESVIR FAFTTLAVLI TGAPMWLVFL YQALSVVLSQ
FNHANIELPR WADRILGLLI VTPNMHHVHH HYVLPVTNTN YGNIFPYWDR IFGTYHEMPG
KAIHYGIDTH TETHEHTHIG NLLKIPFQKY RPPVGEKVDV SEKTLLNS