Gene Slin_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0538 
Symbol 
ID8724266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp660030 
End bp661331 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content51% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003385401 
Protein GI284035471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAG TTAATATAAC CGGCCTGATG GCCGGTTTTT TTATGGCTGC CACTGTGCAG 
ACCACGGTTG CCCAAATAGC TCCCCCAGGA CCTGTTCTGA AAGAAGCCGC AGCAGAAACG
GTTGGTATGA GTACCACCCG GCTTCAGCGC ATGGACGCGG TGATCAACGA CTATATTGCC
AAAGGCCGAC AGGCGGGTGT CGGGGTGATG GTTTCCCGAA ACGGCCGAAT CGTTTACCAC
AAAGCTTATG GTCTCGACAA CATTCAGACA AAAGCGCCAC TGAAACGGGA TGCCATTTTT
CGGATTGCCT CACAAACGAA AGCCATTACC AGTATTGGGC TGATGATGCT GTTTGAAGAA
GGAAAGTTTC TGCTTGATGA CCCCATCTCG AAGTACATTC CGGCCTTCAA AAATCCGAAG
GTGCTGGATA AGTTCAACGA GAAAGATTCG TCGTTCACCA CCGTTCCAGC AAAGCGTGAA
ATCACGATCC GGCAGTTGTT GACCCATACG TCGGGCATTA GCTACCCCGG TATTGGCTCG
AAAGAAGCCG TTGCCATGTA CGCTAAGAAC AAAATACCCA GTGGCATCGG TACGCCTACC
GGCACACTGG CGGATGCCAT GACCCGGCTG GGAGCTTTGC CGCTGCTGCA TCAGCCCGGC
GAAAAATGGA CGTATGGCCT TAGTGTCGAT GTTGTTGGTT ACCTGATCGA AGTGCTGTCG
GGTCAATCGC TCGACCAGTT TCTGCGCAGC CGCTTGTTTG ACCCGCTTGG CATGAACGAC
ACATTCTTTT ATTTGCCAGC GGCTAAGCAA AACCGCCTGA CGATGGTCTT TACCGAGGAT
TCGGTAAAAT CTGTGAAGCC GTTGCCGTCT CTGTTCGGGC TATCGGGCGA TTACCCAAAA
CAGCCGGGAA CGTACTATTC GGGGGGAGCC GGGTTATCGT CAACCATGTA TGATTACGCT
ATTTTCCTGC AAATGATGCT CAATGGCGGT GAGTATGGCG GTAAGCGTTT CCTAAGCCCA
ACCACCGTTC GGCTCATTAC GACCAATCAG ATTGGCGATC TCAATCAGGG AATCAACAAA
TTTGGCTTAG GTTTCTCTAT AACCTCGGAG AAAAGTGCGG CACGGCTACC TGTTTCCGAA
GGGACTTACG ACTGGGGTGG TTTCTTCGGA ACAACCTATT GGGTCGATCC CAAAGAGGGC
ATCATTGCGC AAATCTATAC CCAGAAAGTG CCGAACAGCT ATGGTGATCT GACAGATAAG
TTTAAGGTGC TGGTGTATCA GGCTATAACG CAGATGAAGT AA
 
Protein sequence
MKLVNITGLM AGFFMAATVQ TTVAQIAPPG PVLKEAAAET VGMSTTRLQR MDAVINDYIA 
KGRQAGVGVM VSRNGRIVYH KAYGLDNIQT KAPLKRDAIF RIASQTKAIT SIGLMMLFEE
GKFLLDDPIS KYIPAFKNPK VLDKFNEKDS SFTTVPAKRE ITIRQLLTHT SGISYPGIGS
KEAVAMYAKN KIPSGIGTPT GTLADAMTRL GALPLLHQPG EKWTYGLSVD VVGYLIEVLS
GQSLDQFLRS RLFDPLGMND TFFYLPAAKQ NRLTMVFTED SVKSVKPLPS LFGLSGDYPK
QPGTYYSGGA GLSSTMYDYA IFLQMMLNGG EYGGKRFLSP TTVRLITTNQ IGDLNQGINK
FGLGFSITSE KSAARLPVSE GTYDWGGFFG TTYWVDPKEG IIAQIYTQKV PNSYGDLTDK
FKVLVYQAIT QMK