Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0538 |
Symbol | |
ID | 8724266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 660030 |
End bp | 661331 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | beta-lactamase |
Protein accession | YP_003385401 |
Protein GI | 284035471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAG TTAATATAAC CGGCCTGATG GCCGGTTTTT TTATGGCTGC CACTGTGCAG ACCACGGTTG CCCAAATAGC TCCCCCAGGA CCTGTTCTGA AAGAAGCCGC AGCAGAAACG GTTGGTATGA GTACCACCCG GCTTCAGCGC ATGGACGCGG TGATCAACGA CTATATTGCC AAAGGCCGAC AGGCGGGTGT CGGGGTGATG GTTTCCCGAA ACGGCCGAAT CGTTTACCAC AAAGCTTATG GTCTCGACAA CATTCAGACA AAAGCGCCAC TGAAACGGGA TGCCATTTTT CGGATTGCCT CACAAACGAA AGCCATTACC AGTATTGGGC TGATGATGCT GTTTGAAGAA GGAAAGTTTC TGCTTGATGA CCCCATCTCG AAGTACATTC CGGCCTTCAA AAATCCGAAG GTGCTGGATA AGTTCAACGA GAAAGATTCG TCGTTCACCA CCGTTCCAGC AAAGCGTGAA ATCACGATCC GGCAGTTGTT GACCCATACG TCGGGCATTA GCTACCCCGG TATTGGCTCG AAAGAAGCCG TTGCCATGTA CGCTAAGAAC AAAATACCCA GTGGCATCGG TACGCCTACC GGCACACTGG CGGATGCCAT GACCCGGCTG GGAGCTTTGC CGCTGCTGCA TCAGCCCGGC GAAAAATGGA CGTATGGCCT TAGTGTCGAT GTTGTTGGTT ACCTGATCGA AGTGCTGTCG GGTCAATCGC TCGACCAGTT TCTGCGCAGC CGCTTGTTTG ACCCGCTTGG CATGAACGAC ACATTCTTTT ATTTGCCAGC GGCTAAGCAA AACCGCCTGA CGATGGTCTT TACCGAGGAT TCGGTAAAAT CTGTGAAGCC GTTGCCGTCT CTGTTCGGGC TATCGGGCGA TTACCCAAAA CAGCCGGGAA CGTACTATTC GGGGGGAGCC GGGTTATCGT CAACCATGTA TGATTACGCT ATTTTCCTGC AAATGATGCT CAATGGCGGT GAGTATGGCG GTAAGCGTTT CCTAAGCCCA ACCACCGTTC GGCTCATTAC GACCAATCAG ATTGGCGATC TCAATCAGGG AATCAACAAA TTTGGCTTAG GTTTCTCTAT AACCTCGGAG AAAAGTGCGG CACGGCTACC TGTTTCCGAA GGGACTTACG ACTGGGGTGG TTTCTTCGGA ACAACCTATT GGGTCGATCC CAAAGAGGGC ATCATTGCGC AAATCTATAC CCAGAAAGTG CCGAACAGCT ATGGTGATCT GACAGATAAG TTTAAGGTGC TGGTGTATCA GGCTATAACG CAGATGAAGT AA
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Protein sequence | MKLVNITGLM AGFFMAATVQ TTVAQIAPPG PVLKEAAAET VGMSTTRLQR MDAVINDYIA KGRQAGVGVM VSRNGRIVYH KAYGLDNIQT KAPLKRDAIF RIASQTKAIT SIGLMMLFEE GKFLLDDPIS KYIPAFKNPK VLDKFNEKDS SFTTVPAKRE ITIRQLLTHT SGISYPGIGS KEAVAMYAKN KIPSGIGTPT GTLADAMTRL GALPLLHQPG EKWTYGLSVD VVGYLIEVLS GQSLDQFLRS RLFDPLGMND TFFYLPAAKQ NRLTMVFTED SVKSVKPLPS LFGLSGDYPK QPGTYYSGGA GLSSTMYDYA IFLQMMLNGG EYGGKRFLSP TTVRLITTNQ IGDLNQGINK FGLGFSITSE KSAARLPVSE GTYDWGGFFG TTYWVDPKEG IIAQIYTQKV PNSYGDLTDK FKVLVYQAIT QMK
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