| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0531 |
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| Symbol | |
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| ID | 8724259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 651447 |
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| End bp | 655064 |
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| Gene Length | 3618 bp |
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| Protein Length | 1205 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003385394 |
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| Protein GI | 284035464 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.45658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTT CACATCTTCA CTGCCATACT CAATACTCGC TGCTCGATGG TCAGGCCGAC
ATTAAGAAGC TGATTAAGAA GGCTAAAGCC GATAATATGC CGGCCGTTGC CATCACCGAT
CACGGCAATA TGTTCGGGGT ATTTGAATTT GTAGCCGAAG CCAGTAAACA AGGCATCAAG
CCCATTGTTG GCTGCGAGTT CTATGTCGTG GAAGATCACC ACAAGAAACA GTTTACCAAA
GAGCAGAAAG ACGTTCGGTA CCATCAGCTG TTACTGGCGA AGAACGCGCA GGGCTACAAA
AACCTGGCGA AACTCTGCTC GCTGGGCTAC ATGGAGGGAT TATACGGCAA ATATCCCCGC
GTTACGAAAG AGCTGATCGA CCAGTATAAA GAAGGACTTA TTGCCTCTAC CTGCTGCATT
GGCGCATCGG TTCCCAAAAC GATTCTCAAA AAAGGCGAAG AAGCCGGTGA AATTGAGTTC
AAATGGTGGC TCGACCGTTT CGGTGAGGAT TATTACGTTG AACTGCAACG CCACGAAATT
CCCGACCAGA TCAAAGCCAA CGAGGTATTG ATCAAGTTCG CCCGGAAGTA CAACGTCAAG
ATCATTGCGT CCAACGATTC GCACTATGTC GATCAGGACG ACTGGGTTGC CCACGACATT
CTGCTGTGCG TAAACACCAA CGAAAAGCAG AGCACACCGT CGATGAAGGA CTTCAGCGAC
GACGATGTGA TGCCTAAGAA TACCCGCTTT GCGTTCTTCA GCGACCAGTT CTATTTCAAG
AACACGCAGG AGATGACGAC GCTTTTCAAA GACCTGCCCG AAGCCATCGA CAATACCAAC
GAGATTGTCG GCAAGGTCGA AACGCTGAAG CTCAAGCGCG ACATCATGTT GCCTAACTTC
CCGATTCCGA AGGAGTTCCA GCAGCATACC GACGACGTAC TGAACCAGTG GGAATACCTG
CGTCACCTGA CGTACGAAGG GGCCAAAGAA CGGTACGTCG ATATTCTGCC ACATATCCAG
GAACGCCTTG ATTTTGAACT GTTCACGATC AGGACAATGG GATTTGCCGG GTACTTCCTC
ATCGTGGCCG ACTTCATCAA AGCCGGGCGC GACCTGGGCG TGATGATCGG GCCGGGACGG
GGCTCGGCTG CCGGTAGTGC GGTGGCGTAC TGCACCGGTA TCACCAATAT CGACCCCATC
AAGTACGACC TGCTGTTCGA GCGTTTTCTT AACCCCGACC GGAAGTCGAT GCCCGATATC
GATACGGACT TCGACGATGA AGGCCGTCAG AAGGTAATCG ACTACGTGGT GCAGAAATAC
GGAAAAGCGC AGGTGGCGCA GATCGTGACC TACGGTACCA TGGCCTCCAA ATCGTCCATC
AAAGACGTAG CGCGGGTGAT GGATTTACCC TTGCAGGATG CCAACGCCGT AGTGAAGCTC
GTGCCCGACA AGCCGACCTA CAACATGACG CTCAAGCGCA TCTTCGAGGA CCCCATCGAC
GGGCCGGGCG GGCTTTCCAG TGTTATTCAG CCCGACGAGG TGGAAAACGT GAAGCGAATG
CGGGCGCTGG AAGCTGGCGA CAAGAGTGCG GCTCAGGCCA TGCGCATAGT GGATTTTGAA
AAGGTATCGG CGGTACTCAA ACAGGCGCGT AAACTCGAAG GCACGGTCCG GAATACAGGC
TTACACGCGG CCGGAATCAT CATTGCGCCC AGCGACCTGT CGGACATTGT GCCCGTGTCG
ACCTCAAAAG ATACGAACCT CATTATTACC CAGTATGAGG GTAAAGTGAT TGAAGATGCG
GGCGTTATCA AGATGGACTT TTTGGGGTTG CGCAACCTCA CCATCATTAA GGAATGTCTG
CGGCTCATCA AGCAGAACCA CGATGTTACC ATTGCCATCG ACGATATTCC CCTGGACGAC
GAAGAGACCT ATAAGCTCTT CCAGCGGGGT GAAACCAACG CCGTGTTCCA GTTTGAATCC
GACGGCATGA AAAAGCACAT GAAGGACCTG AAGCCTGACC GCTTCGGTGA CCTCATTGCT
ATGAACGCCC TCTACCGACC CGGCCCGATT GCCTACATTC CGAACTACAT CAACCGGAAA
CACGGCCGCG AAGAAGTCAA ATACGACATG CCGGAAATGG AGGAGTATCT GGCGGATACG
TACGGCATTA CCGTGTACCA GGAGCAGTTG ATGCTGCTGT CGCAGAAGCT GGGCAACTTC
ACCAAGGGCG ACGCCGACGT ACTGCGGAAG GCGATGGGTA AGAAAGACAA GGCTACGCTC
GACAAGATGA AGGGTAAGTT TATGGATGGC TGTGCCGCCA ACAACCTGCC GCTGAAAGTC
TGCGAGAAAG TCTGGACCGA CTGGGAAGCC TTTGCTTCGT ACGCCTTCAA CAAGTCGCAC
TCGACCTGCT ACGCGTTTGT GGCCTATCAG ACGGCCTACC TCAAAGCGCA CTACACCTCG
GAGTACATGG CGGCCGTTTT GACAAGCTGT CTGGGTACGA TTGATAAGAT TACATTCTTC
ATGGAAGAGT GTAAAAACCT TGGTTTGCCC CTGCTGGGAC CGGATGTCAA CGAGTCGGAG
CGGTTCTTCG GCGTGAACAA GAAGGGCGAA ATCCGCTTTG GATTGGGCGG TATCAAAGGT
GCAGGCGATG CGGCCGTCGA AGCCATCATC GAAGAGCGTA AAGCCGGTGG CCCTTACAAA
GATATTTTCG ATTTTGCCGT GCGGGTCAAC CTCCGGACGG TTAACAAAAA AACCTGGGAA
TCGCTGGCTT ACGCGGGTGC GTTCGACTCC ATCGACGAGT ACCACCGGGC GCAGTATTTC
GAGATGGCGG AGGGAGACAC CTCGCCGTTT CTGGACAAGG TTATCCGCTA CGCTAACAAC
TACCATGCGG AGAAAGCCGC AGCCCAGCAG TCGTTGTTTG GGGCCATGAT GAATGGCGAG
CCCATGATTG CCCGGCCCAA ACCACCTATC GTAACGGAGT GGAACCAGAT TGAGAAGCTG
AAATACGAGA AGGATGTAGT GGGTTTTTAC ATCACCGGCC ACCCGCTCGA TGAGTTTAAA
CTGGAGCTGG ACGGCTTCTG CAACTGCACG CTGGATAAGA TTTATGAGAC CCGCCAGCCC
GAAATAAAAG TGGCCGGTAT CGTTTCGTCC ATGCAAACCA AGATCGCCAA GAATGGTAAC
CCGTTCTGTA TCTTCAAAAT TGAAGACTAC AACACGTCCA TCGAACTGGC GCTGTTTGGG
GAGGATTATG TCCGGATGGG CCAGTACATT GAGGTAGGCC GATTCCTGCA CATTACGGGC
AAGACCCAGA ATCGGTGGAA CTCCGAGAAT CTGGAATTCA AGGCCACGAA CATCCGCTTA
CTGACCGAGA TGCGGGAGAA ATTCTGCAAA GAGCTGCGTG TCTCGCTAAC CATCGACTCA
CTCAATGCCC AGGTCGTAGC TAAAATTAAC GAACTGGTCA ACGCCCACCC CGGCACCTGT
ACGCTATCGC TCAACGTTGT CGACCCCAGT GAACGTATCG AAATCAGTTT ACAGGCACGC
ACGCTGAAGG TATCGCCCGC CAACACCCTG CTCAGGTCAC TGGAAGCCAT GGACGGCGTG
ACGTGTAAGG TGGCGTAA
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| Protein sequence | MQFSHLHCHT QYSLLDGQAD IKKLIKKAKA DNMPAVAITD HGNMFGVFEF VAEASKQGIK
PIVGCEFYVV EDHHKKQFTK EQKDVRYHQL LLAKNAQGYK NLAKLCSLGY MEGLYGKYPR
VTKELIDQYK EGLIASTCCI GASVPKTILK KGEEAGEIEF KWWLDRFGED YYVELQRHEI
PDQIKANEVL IKFARKYNVK IIASNDSHYV DQDDWVAHDI LLCVNTNEKQ STPSMKDFSD
DDVMPKNTRF AFFSDQFYFK NTQEMTTLFK DLPEAIDNTN EIVGKVETLK LKRDIMLPNF
PIPKEFQQHT DDVLNQWEYL RHLTYEGAKE RYVDILPHIQ ERLDFELFTI RTMGFAGYFL
IVADFIKAGR DLGVMIGPGR GSAAGSAVAY CTGITNIDPI KYDLLFERFL NPDRKSMPDI
DTDFDDEGRQ KVIDYVVQKY GKAQVAQIVT YGTMASKSSI KDVARVMDLP LQDANAVVKL
VPDKPTYNMT LKRIFEDPID GPGGLSSVIQ PDEVENVKRM RALEAGDKSA AQAMRIVDFE
KVSAVLKQAR KLEGTVRNTG LHAAGIIIAP SDLSDIVPVS TSKDTNLIIT QYEGKVIEDA
GVIKMDFLGL RNLTIIKECL RLIKQNHDVT IAIDDIPLDD EETYKLFQRG ETNAVFQFES
DGMKKHMKDL KPDRFGDLIA MNALYRPGPI AYIPNYINRK HGREEVKYDM PEMEEYLADT
YGITVYQEQL MLLSQKLGNF TKGDADVLRK AMGKKDKATL DKMKGKFMDG CAANNLPLKV
CEKVWTDWEA FASYAFNKSH STCYAFVAYQ TAYLKAHYTS EYMAAVLTSC LGTIDKITFF
MEECKNLGLP LLGPDVNESE RFFGVNKKGE IRFGLGGIKG AGDAAVEAII EERKAGGPYK
DIFDFAVRVN LRTVNKKTWE SLAYAGAFDS IDEYHRAQYF EMAEGDTSPF LDKVIRYANN
YHAEKAAAQQ SLFGAMMNGE PMIARPKPPI VTEWNQIEKL KYEKDVVGFY ITGHPLDEFK
LELDGFCNCT LDKIYETRQP EIKVAGIVSS MQTKIAKNGN PFCIFKIEDY NTSIELALFG
EDYVRMGQYI EVGRFLHITG KTQNRWNSEN LEFKATNIRL LTEMREKFCK ELRVSLTIDS
LNAQVVAKIN ELVNAHPGTC TLSLNVVDPS ERIEISLQAR TLKVSPANTL LRSLEAMDGV
TCKVA
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