Gene Slin_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0505 
Symbol 
ID8724233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp621164 
End bp621838 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385368 
Protein GI284035438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCCTGCTTTT CGCTTCGCTC GCCCTGCTGC CAGCTCTGTC ATTTGCACAG 
GGTGGTTTCC AGATTGGTAT TAAAGGCGGT GTCAATTTAT CCAAACTGAG TTTTGGCAAC
TTCATTCGAA CTGGAACGAG TGGAACCGGT TCGCCAACCG TAAATATTGA CGGGCAAACC
TTTCGAAATA ACTTAAGTGA TAGTTTCGAT AGCAAAACGG GTACCTCCTT CGGTATTTAT
ACGCGCTTCG GTAAAAACCT GTTTATTCAG CCTGAGTTAC TTTACTCAAC ACGTTCGGGC
CAGTTTGGGG TTATTCGCAA TGGGCAAACA GAAACGGTTA CGGTGAAGAC CACAAGTTTT
GATGTTCCGC TGCTGCTGGG CATTAAAGGT GGGCCCATTC GGGTAATGGC CGGTCCGGTT
GTTTCTTTCC GAATCGACGA TAATCAGAAA CTTGGGCAGG CACTAAGTCA GTATACCAGT
GGCAGTCTTA ATGATGCCTG GTCTAAAGCG TATTATGGTT ATCAGGTAGG TGGTGGCCTG
GATCTTGGTT CGCTGGGAAT TGATGTGCGT TATGAAGGCA ACCTATCCGA CATTGCTCAA
ATTGAAGACA GCCAGGGCAA ATTCAGCCAG CGCCTAAAGT CTTGGCAGAT TACACTGGCC
TATAAACTGT TTTAA
 
Protein sequence
MKKILLFASL ALLPALSFAQ GGFQIGIKGG VNLSKLSFGN FIRTGTSGTG SPTVNIDGQT 
FRNNLSDSFD SKTGTSFGIY TRFGKNLFIQ PELLYSTRSG QFGVIRNGQT ETVTVKTTSF
DVPLLLGIKG GPIRVMAGPV VSFRIDDNQK LGQALSQYTS GSLNDAWSKA YYGYQVGGGL
DLGSLGIDVR YEGNLSDIAQ IEDSQGKFSQ RLKSWQITLA YKLF