Gene Slin_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0496 
Symbol 
ID8724224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp612619 
End bp613569 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385359 
Protein GI284035429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT CATCATTCTG GCGCATTGCG ACGGCGGTCT TTGCCGTTGG CAGCATCATC 
TATACAACCA CATCCAGCAG TCGGTCACGG CAACAAAGCA AGTCCCGTCA TGATGCCGAC
CAGAGCGGAT CAGAATACGA ATATGATGTG CCGGTAGAGT ACGAAGAGGT CTTCGAGAAA
AACATGATCG TACCGGCAGG CTGGGCATTT GGCGTGGTCT GGTCTACGAT CTATTCGGGT
TTGGGGGCAT TGATGGTTCA TCAGGCTCTG CCTTCGCAGG AAAACAACCC ACGCTACCAG
AAAGCGTTAC CCTGGTGGCT GGCCAGTTGG ACGCTCAACG CCATTTTTGG CCGGTTTTTC
TCCCAGAATG ATCCGCAAAG CATTATCATC TCCGACCTGA CCACCAAGTT CAACCTGCCA
GCCGCCCTGG GTTTGCATCA GAGTTTGGAA ATCGGAAAAA CCGACGTGTC GGGACCTGAA
AAGTACCTCC GCATTCCGGT CAGTCTGTAC GCGGGCTGGC TAACAGCGGC AACGGTTGTC
GGTACGCCAA ATACCATACT GACGCTGAAT GCCTGGGAGC CCGACGAAGA GCGCGATGAA
CCTGTTTCGG CCGGGATTCT GAGTGCCACC GCCGGAGCAG GTTACCTCAT TGCCAATCGA
CTTAACGACC CCTGGTATAT GGTACCTTTC GTAGCCGGGT TTAGCGGTAT TGCCACACGG
CAGTGGGAGA AGCAACCCGT TGTTGGGTGG ACGGCGGCCA TGCTAGCGGC TGCTTATGTT
GGGCTGCTGG CGTACTGGCT CCCTAAAGGT AAATTTCATG AATATGACCA ACACGCTATT
GACGACACCG AAGCTGAAGT CCTAAGCGGA CCGGTTGAAA CTTGGGAACC CCATCAGGCG
GAGATAGCCC GGGAGCGAAT GAAGCCCATA GAAGCCGAAG GGCTCGATTA A
 
Protein sequence
MKNSSFWRIA TAVFAVGSII YTTTSSSRSR QQSKSRHDAD QSGSEYEYDV PVEYEEVFEK 
NMIVPAGWAF GVVWSTIYSG LGALMVHQAL PSQENNPRYQ KALPWWLASW TLNAIFGRFF
SQNDPQSIII SDLTTKFNLP AALGLHQSLE IGKTDVSGPE KYLRIPVSLY AGWLTAATVV
GTPNTILTLN AWEPDEERDE PVSAGILSAT AGAGYLIANR LNDPWYMVPF VAGFSGIATR
QWEKQPVVGW TAAMLAAAYV GLLAYWLPKG KFHEYDQHAI DDTEAEVLSG PVETWEPHQA
EIARERMKPI EAEGLD