Gene Slin_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0478 
Symbol 
ID8724206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp592371 
End bp592937 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID 
Productsiroheme synthase 
Protein accessionYP_003385341 
Protein GI284035411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.598281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.875071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC TCTTCCCTAT TTTCGTTAAA GCCGAGAACC TGCATCTGCT TATTGTGGGC 
GGAGGATATG TTGGTCTGGA AAAGCTCACG GCTTTGCTTG GCAATTCGCC CGAGGCCCGC
GTTACGCTGG TGGCGCCCGA AATTCGGGAG GAGATTCGGG ACATGGCAAC CCGATACCCT
AAACTGGAAC TCATTCAGGA GCCGTACCAC GATCTGTATT TATCGAATAA AGACCTCGTC
ATTGTTGGGA CGAACGACAA AACCGTCAAT CGGCAGGTAC AGGCAGATTG CAAAGCCCGC
CAGATTCTGG TCAACGTCGC CGATACGCCT GACCTGTGCG ACTTTTACCT GAGTTCGGTT
GTCAAGAAAG GCGACTTGAA AATCGCTATT TCAACCAACG GTAAATCGCC CACCTTCGCC
AAACGATTCC GGGAAGTGCT GGAAGAAATT CTGCCCGACA GCTTGCAGGA AACGCTCGAC
AATCTGACCG CCATCCGTAA TCAGCTCAAA GGGGACTTCG TGCAGAAAAT GGAGAAGCTC
AACGAGATCA CAAAGGTCTT GCGGTAA
 
Protein sequence
MNTLFPIFVK AENLHLLIVG GGYVGLEKLT ALLGNSPEAR VTLVAPEIRE EIRDMATRYP 
KLELIQEPYH DLYLSNKDLV IVGTNDKTVN RQVQADCKAR QILVNVADTP DLCDFYLSSV
VKKGDLKIAI STNGKSPTFA KRFREVLEEI LPDSLQETLD NLTAIRNQLK GDFVQKMEKL
NEITKVLR