Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0473 |
Symbol | |
ID | 8724201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 587665 |
End bp | 588309 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Caffeoyl-CoA O-methyltransferase |
Protein accession | YP_003385336 |
Protein GI | 284035406 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.661805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTTTT TACCACCCGC TATAACCACC TACTCCGACG CCCATACCTC GCCCGAAAGC GAGTTGCTTC AACGGCTCAA TCGGAATACC CGCGCTCATA TTATGGCTCC CCGGATGCTG TCGGGGCATG TCCAGGGGCG TTTTCTGTCG ATGATTTCGT GGATGATTCG TCCCCGGTAT ATTTTGGAAA TTGGTACTTA TACCGGCTAT TCAGCCCTTT GTCTGGCCGA GGGATTAGCG GAGGATGGCC AGTTGATTAC CATTGACCAG AATGAAGAGC TGGAGGACTT TGCCCGGTCG TACTGGCGGC AGTCACCGCT GGACCATAAA ATTGACTTTC GGCTCGGAAA GGCCGTGGAT ATACTGCCAA CCCTTACTGA AACGTTTGAC CTGGTGTTCA TTGATGCCGA CAAACGTAAC TTGTCGACCT ATTTTGATCA GATAATCGAT AAAGTGCGGC CGGGTGGTTT TATTCTGGCC GACAACGTTT TATGGAGTGG CAAGGTTGTT GAACCGGTAA AACCATCTGA TTTGGATACA CTTGCTGTGC TGGCTTTTAA TGAAAAGGTT CATAATGATT CGCGTGTGGA AAATGTGCTG CTACCCGTAC GAGACGGGAT TATGATGCTT AGAAAACGAA ATTGA
|
Protein sequence | MDFLPPAITT YSDAHTSPES ELLQRLNRNT RAHIMAPRML SGHVQGRFLS MISWMIRPRY ILEIGTYTGY SALCLAEGLA EDGQLITIDQ NEELEDFARS YWRQSPLDHK IDFRLGKAVD ILPTLTETFD LVFIDADKRN LSTYFDQIID KVRPGGFILA DNVLWSGKVV EPVKPSDLDT LAVLAFNEKV HNDSRVENVL LPVRDGIMML RKRN
|
| |