Gene Slin_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0469 
Symbol 
ID8724197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp584222 
End bp586138 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003385332 
Protein GI284035402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATC GATTTAGCCA ACAGATATGG TTATGCCTGT CTCTATCAGT AGCCGTGGGC 
ACAGCCTGGG CAGGTCCGGC CCCCAAGCCA GCCGCCGTTC GAAAATACAC CATCGAGCAA
TTCATGAAAA CCATTCGCTT CGGCGGGTCC GACATTTCGC CCGACGAAAA GACGGTGCTG
TTCACTAGTA ATCAGGATGG TGTCTTTAAT CTTTATGAAA TTCCTTTCGA TGGCAGCGGC
CAGCCAAAGC AACTGACCAA ATCGACAACG AACGCCATTT ATGTGCTTGG CTATCTGCCC
GACGGCCGGA TTTTATATAG CAGCGATCAG GGGGGTAACG AGCTGAGCCA CATCTACCTG
CGCGAAAAAG ATGGCGCCGT AAGCGACCTG ACTCCTGCCG AAAAAGCAAA GTTTCAGTTT
GCCGGGCTGA GCTACGACCG TAAAAGTTTC TTCTACCAGT CGAACCAGCG CAACCGGGCG
GCTTTCGATG TGTACGAGAT GGATATCGCC ACCATGAAGC CCAAACTCCT GTTCGAAAAT
CCGGGCGGTT TCTTTCCCGG TGATGTATCC CCCGATAAAC GGTACATCGC GCTGGCAAAA
ACCAGCACGA CAACGGATGG CGATGTGTAC CTGTATGATA CAAAAACGAA AGAAACCAGG
CTGCTTACCA AACACGAAGG CGATGTAAAT AATGGCCCGG AAGGATTCAC CCCAGATGGA
AAAAAACTCC TCATCCGTAC GGACGAAGGC AACGAATTCG CCTATGTAAA AGCCTACGAT
TTAGCCAGTG GTCAAAGTAC TGTACTAGAT AAAGCCAACT GGGATATTTC GGGCGACTAC
CTGTCGTACC GGGGGCATTA CCGCATTCTG TCGGTCAATA ACGACGCCCG TACCGAACTC
AAAATCATTG ACACGCGTAC AAATCAACCC GTTAAGCTGC CCGCGCTACC CGGTGGCGAT
ATTACCGGCG TGACCATTAC CGACAGCGAA GGGCGAATGA CGTTTTATGT AAACAGTTCC
AACTCGCCCG CAACGCTTTA CTCGTACGAC TTTAAATCGG GTAAAGTAAC CCCTTTGGTA
CGGGGACTGA ATCCGGATAT TGATCCCGAC GACTTGGTTG CTGGTGAAGT AATTCGGTAT
AAATCATTTG ACGGGATGGA AATACCCGCC CTATTGTATA AGCCCAAAGA GGCCGGTTCA
GGGGCTAAAC TGCCCGCTAT TCTCTCCATT CATGGGGGAC CGGGTGGCCA AACCCGCCTG
ACCTACTCGC CCCTGGTGCA GTATCTGGTA AACAGCGGTT ATGTGGTTCT GGCGGTCAAC
AACCGGGGAA GCTCGGGCTA CGGCAAAACG TTCTACGCGG CCGACGACCG CAAACATGGC
GATGCCGACC TGAAAGACTG TGTGGAGTCG AAGAAGTTTC TGACCGCAAC CGGCTATGTC
GATCCGGCCA GAATCGGTAT CATGGGCGGT TCTTACGGTG GGTACATGAC ACTGGCCGGA
CTCACCTTTA CCCCCGATGA CTTTGCCGTC GGCGTGGATA TTTTCGGAGT AGCCAACTGG
CTCCGAACGT TGAATAGCAT GCCCGAGTGG TGGGGCCCAC AGCGCGATGC CATGTTTAAA
GAGATTGGCC ACCCCAAAAC GGACTCCGTG GCGCTGTACA ATAAATCGCC CTTGTTTCAT
ACCCAACGGA TCAAAAAGCC TCTTCTGGTT ATCCAGGGAG CGAATGACCC GCGTGTGCTG
AAAATTGAAT CGGATGAGAT TGTCGCTAAT GTCAAGAAAA ACGGTGTCCC TGTTGAATAC
GTCACCTTTC CGGACGAGGG ACACGGCTTT GTGAAGAAAG AAAATGAGAT TACCGCGTAC
AAAGCGGTAC GGGAGTTTCT GGATAAATAC CTTCGGGGAC CGGACCTCGT AAGGTGA
 
Protein sequence
MPNRFSQQIW LCLSLSVAVG TAWAGPAPKP AAVRKYTIEQ FMKTIRFGGS DISPDEKTVL 
FTSNQDGVFN LYEIPFDGSG QPKQLTKSTT NAIYVLGYLP DGRILYSSDQ GGNELSHIYL
REKDGAVSDL TPAEKAKFQF AGLSYDRKSF FYQSNQRNRA AFDVYEMDIA TMKPKLLFEN
PGGFFPGDVS PDKRYIALAK TSTTTDGDVY LYDTKTKETR LLTKHEGDVN NGPEGFTPDG
KKLLIRTDEG NEFAYVKAYD LASGQSTVLD KANWDISGDY LSYRGHYRIL SVNNDARTEL
KIIDTRTNQP VKLPALPGGD ITGVTITDSE GRMTFYVNSS NSPATLYSYD FKSGKVTPLV
RGLNPDIDPD DLVAGEVIRY KSFDGMEIPA LLYKPKEAGS GAKLPAILSI HGGPGGQTRL
TYSPLVQYLV NSGYVVLAVN NRGSSGYGKT FYAADDRKHG DADLKDCVES KKFLTATGYV
DPARIGIMGG SYGGYMTLAG LTFTPDDFAV GVDIFGVANW LRTLNSMPEW WGPQRDAMFK
EIGHPKTDSV ALYNKSPLFH TQRIKKPLLV IQGANDPRVL KIESDEIVAN VKKNGVPVEY
VTFPDEGHGF VKKENEITAY KAVREFLDKY LRGPDLVR