Gene Slin_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0467 
Symbol 
ID8724195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp583139 
End bp583924 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content50% 
IMG OID 
ProductProtein of unknown function DUF2490 
Protein accessionYP_003385330 
Protein GI284035400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGTC TTCGTTTTAA GGTTTATTTA GTCGCAGGTC TTCTTGCTCT TACGCTTACC 
AGTTCCTTCG CCCAAACCTC TCTTACGCCC TCTTCTCCCT GGGGAACCTG GCTTATTGGT
ACCATTCAGC TACCTACTGG CCCGAAAAAA TGGGGAGGCT TTGCCGAAGT TCAGGGCCGG
GCCAACGGCG CATTCAGCCA GTTTTTTTAT AATGAATTGA AGGGCGGGGT AAGCTATGAC
CTCGACAAAA ACTTCACGCT GACTTTAGCG GGCGGGCGTT ACGCTACCTA CGATTACAAA
GCGCTGTCCG ACGGTCCGCT CAACACCGAG AAGCGGCTCT GGGAGCAGCT TATTATTAAT
CAGTACCTGA CCCGACTGAA ATTTGAACAC CGGTACCGGG TTGAACAACG CTGGTTTACC
TTTCGCGACG GAACAACCCC CTACCGAAGC CGGATTCGGT ATCGACTTAA TACGTTCATA
CCGCTAAACA ACCACACCGT TAAGGAAAAA ACGTCCTTTC TCTCCATTTA CGACGAGATT
TTCCTGAACC CGATTGGGCC AACGTTTGAA CGGAATCGTC TTTACGCGGG CGTTGGTTAC
CAATTCGACC AACAGTGGAT CGTACAACTG GGCTGGGTAA ACCAGACCAA CTATAACGCA
GCTAACTTCG ATCAGGGTGT TTTCACCCCC TTACTGGCAA CCGGAAAAAA TAATATAGTA
ATTGGGCTGA CCTACCGTCT TAAACGCAGC AATACACCCG AACGCCTGCC AACACAGCCG
GATTAG
 
Protein sequence
MIRLRFKVYL VAGLLALTLT SSFAQTSLTP SSPWGTWLIG TIQLPTGPKK WGGFAEVQGR 
ANGAFSQFFY NELKGGVSYD LDKNFTLTLA GGRYATYDYK ALSDGPLNTE KRLWEQLIIN
QYLTRLKFEH RYRVEQRWFT FRDGTTPYRS RIRYRLNTFI PLNNHTVKEK TSFLSIYDEI
FLNPIGPTFE RNRLYAGVGY QFDQQWIVQL GWVNQTNYNA ANFDQGVFTP LLATGKNNIV
IGLTYRLKRS NTPERLPTQP D