| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0460 |
|---|
| Symbol | |
|---|
| ID | 8724188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 572726 |
|---|
| End bp | 573868 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003385323 |
|---|
| Protein GI | 284035393 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TCATAACGCT AATTGGAATA GCCTCTTTTG CTGTTGGCTT TACGGCCTGT
TCGTCGGCCA GCAGCGATAA CAAACCCGCT GAAACCAAAG AACCGGCCAT ACAACAGGTT
GAGGTAACGA CTGTACAGGC TTTACAACCC AGCAACCGCG TTACTCTGCC CGGCGAACTG
AAACCCTGGA ACCGTGTAAA TATGTATGCA AAAGTAAAAG GCTTTGTGCG CGATGTGACC
GTAGACCGGG GTACAACTGT TCACAAAGGA CAGATACTCG CCCGGCTCGA CGCACCCGAA
GTCATCTCGG AACTCAGCCA GGCGCAGGCG CAGGTTCAGG CGCAGGAGGC TACCCTGGTG
GAGCAGACAA CGCGGGCCCG TGCCAGTAAA CTGACCTACT CCCGGCTGGT ACAAACGGCG
AAGATGGAAG GAGCCGTGTC GGCTAATGAA CTCGATCAGG CACTGGCAAA GATGCAGGCC
GACAGCGCCA TGGTTGCGGT GGCACGGGGA ACGGTTCAGG CAGCCCGCTC AAACTATCAG
GCCAAGACGG AACTTCGGCA ATACCTAACC ATTACGGCTC CTTTCGATGG GATGGTCATC
GAGCGGAATA TCAGCCCCGG TGCCCTGGTC GGCGCGGGCG ACAGTGGGAA GCCGCTGTTC
GTGCTGGAAG ACAGCCGAAC GTTACGACTG ACGGTTGCCA TTCCGGAAAC CTTTGCCAAT
CAGCTTCCCA AAAAGAGTGC CGTTTCATTC TCGGTCAACG CCATGCCTAA CCGCCGGTTC
AACGCGAAGC TGGCCCGCTC GGCTGAAAGT CTGGTAGAAA CGAACCGGGC CATGATGGCG
GAATTTGACG TAGCCAACGC ATCCCACGAG CTTAAATCAG GCATGTACGC TGAGGTGATG
ATGCCGGTGG AGCGATCGGG CAAAACGCTG TTCGTACCGA CAACATCCGT CGTTAGTTCG
AGTGAGAAAA TGTTTGTTAT TAAAGTAAAC GACAACCGGG CCCAGTGGGT GTCGGTTCAG
AAAGGCAACG TCGTAGACAG TCTGGTGGAG GTATTCGGCG ACTTACAGGC CGGGACAGCC
ATCGTGAAGA AAGCGTCGGA AGAAATCCGG GACGGGCAGG CAATCAAAGC CGTGCAGAAG
TAA
|
|---|
| Protein sequence | MKLLITLIGI ASFAVGFTAC SSASSDNKPA ETKEPAIQQV EVTTVQALQP SNRVTLPGEL
KPWNRVNMYA KVKGFVRDVT VDRGTTVHKG QILARLDAPE VISELSQAQA QVQAQEATLV
EQTTRARASK LTYSRLVQTA KMEGAVSANE LDQALAKMQA DSAMVAVARG TVQAARSNYQ
AKTELRQYLT ITAPFDGMVI ERNISPGALV GAGDSGKPLF VLEDSRTLRL TVAIPETFAN
QLPKKSAVSF SVNAMPNRRF NAKLARSAES LVETNRAMMA EFDVANASHE LKSGMYAEVM
MPVERSGKTL FVPTTSVVSS SEKMFVIKVN DNRAQWVSVQ KGNVVDSLVE VFGDLQAGTA
IVKKASEEIR DGQAIKAVQK
|
|---|
| |