| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0448 |
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| Symbol | |
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| ID | 8724176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 557160 |
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| End bp | 560504 |
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| Gene Length | 3345 bp |
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| Protein Length | 1114 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | histidine kinase |
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| Protein accession | YP_003385311 |
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| Protein GI | 284035381 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.823175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC ATAGGGCACA TTTCGACCAC TGGTTAAAAT CGGCTTGTGC ACGTTGGTTC
GGGTGGTACA CCGCCGTATT CATCCTGTCT GTTTCGTTTT CCCGCACAAG TGCCCAGCCA
GCAGCGGACA AGTTTGACCA TTTATCGACG AAAAATGGCC TTTCCAATAA CTCAATCAAC
TGTATCCTTC AGGATCGGGA AGGATACATG TGGTTCGGTA CGAACGATGG GCTCAACAAG
TATGACGGCT ATTCGTTTCA GGTTTTCCAG ACCGACCCCG CCCGCCCTGC GCACAGTTTA
ACCGACAACC GGATTATGGG CCTTTGCGAA GACCCGAAAA ACCGACTATG GGTGGTTACG
GAAGGGGCCG GTTTGCATGA AATCAATAAA CAAACGGGCA ATGTAACCCA CCATCCCATT
CATGCCGACC ACGAAAACTG GTGGAACAAC CAGATATCTA TATATGCAGA CCGACAGGGG
GTTTTGTGGC TCTGCTCGTA CGGCGGACTT ATTCGGTATG AACCGGAAAG ACATCATTTC
ACGCTGTACC CATCGCCCAA ACGGGAAGTT CCGGTAAAAA GCGTTTTCGA AGATCGGCAA
AACCGATTTT GGGTAACTAC CTCGCAGGGG TTGTATTTAT TTGATCGGCA GACCGGCCAC
TTTGCACTGA TGCCCGTTCA AAAAGCGACG GACCCGCAGC CCTGGTTCGG CCCCATGTAT
CTGGACAGCA ACGATGTTCT CTGGCTTGGT GCCGTTGGGA AAGGCCTTTT TCAGCTTGAC
CTCCGCCATT CACCCCTCCG GATTGTGCCT CATGCCACGA AAGGCACAAT CAACAAGTAT
ATGTATCTGG GCGCACTCCA CCGCGACCAG CAGGGTTTTA TGTGGATGGG TACAACCGAT
GGGTTGCAAC GTATAGACAC CAAAACGTCA CAGGCGTTCA CCTACCTTCC CAATCCGGAT
GCACTCCATA ATTTAGGGAG TATGAATGTG CAGGCTGTTT ATCACGACCG GGCTGGTACG
CTCTGGGCAG GTACCGATAA CGGTATCGAC AAACAGGCAC TCAATACTAA ACCGTTTACA
ACGTATCAGA TAAGACGCAG TGTAGGAATC GTCAATCTGC CTGAAAATAA AGTCGCTTCG
CTGGCAATAG ATAGCCGCAA CCGGGTCTGG TTCAGTAATC AGGAAAACCT GTATCGATTG
AATTTACGGA CAAATCAGAT TACCGAAATT CCGGCAAGCC TGTTTGGCAA CACACCACAA
CATAAAAACA ACCTCCATGC CCTGTTTCAG GATGGCCAAG ACAAACTTTG GATTGGTACA
TGGGATGGTC TTTATCAACT GGATCAGCTC ACGAACCGCT CCATTAAATT TCCGACCGAA
GTTGCAGCCC AGTTTGTTGG TCGGGGCAAA AACGGCAAAA TATGGCTGAG TGGTGAAGGC
GGGGCAGCAT CCTTCGACCC TCTCAACTCG AAATTCACGT ATTACAAGTA TAACCCATCG
GATACGAGCG GCTTACCCGA AAAGTATATT TATGGTATGC TGATCAGCCA GACGGGCGAT
ATCTGGCTAA CCCTTCGGGG TAAAGGGTTG AGTAGATTAA ATCCACAATC GGGACGATTT
ACCCACTACA GAGCCGGCAT GAAACCGGGA CAGTTAAACA GCAACGAGAT CGGGACCATT
TATGAGGACA AGTCAGGCAC CATCTGGCTG GGTAGTACCC GGGGCGGCCT AAACTGGTTT
GATCCAAAAA CCGGCAAATT TTCACACCTT ACCACCAAAG ACGGCCTACC CAGCGACTGG
ATTATTGGTA TAACGGAAGA CAACCGAGGC TACTTGTGGC TGAGCACCAA AAAGGGCCTT
TGCCGGTTTG ATCCGCGAAC TAGATCGTTT CGTCCTTACG ACAACAACGA CGGGTTGCCA
AATAACGACT TCCGGGTAAA TACCGTGTCG CGGTCCGGGA ACTCGCTTTT CTTTGGTACC
CTCAACGGGC TGGTTCGGTT CAATCCCGAC AGTATTCAAA CCGACAGGCA ACCCTTTCCG
GTTTACGTTA CCACGTTTAA AGTAGGCGAT AGCTTTTTGC CGGTAACTCG TAAACAATAT
ACGCTGGCTC ATCATGAAAA CTATCTGTCG TTTGAATTCG TAGCCCTGAC GTATGGCCTG
CCGGAGCGAA ATCAATACGC CTATAAGCTA AGCGGTATTG ACAATGACTG GATAAAAAAC
GGGAGCCGTC GATTTGCCAG CTACACGAAT TTACCGGCCG GAAAGTATAC TTTTCAGGTC
AAAGCAGCTA ATAGCGATGG CGTCTGGCGC CAGCTCGAAA GCCCACTTAC CATCCAGATT
CTTGCCCCCT GGTGGCAAAC TTGGCCTGCT TATGTGCTGT ATACATTAAC CGGGCTGGGC
AGTATGTGGG CATTGGCGAC GTATCGATCC CGAAAGTTAC TCCTGGCTAA TCGGCAGTTG
GAAGATATTA TAGCCAATCG AACTAACGAG ATTCGGCGGC AGAGCGATGA ACTGGCATTG
CAGCGCGACA GCCTGGAAAA AACCCTGACC GAGCTGACCT CTACCCAACG ACAATTGATT
CATCGGGAAA AAATGGCTTC GCTGGGCGAA TTGACGGCGG GTATTGCGCA TGAAATTCAA
AACCCGCTCA ACTTCGTCAA CAACTTTTCG GAAGTAAGTA CTGAACTGGC CGGAGAGCTT
CTCGATCTAT TGGCAAATGG CCAGCAGGCA AATGCCGCCA CCCTGGCCAG CTACATACAG
GCCAACCTCC AAAAAATTAA TCATCATGGC AAACGGGCCG ACTCTATTGT AAAAAACATG
CTACAGCACA GCCGTTTCAG CAACGGGAAA AAGTTTCCGA CCAACCTGAA CAAACTGATT
GATGAGCATC TGCGTCTGGC TTATCAGGGA GTCCGCGTAA ACGATAAATC AATTACGGTT
CACCTGGTCA CAGACTTCGA CCCTACGATT GGTGTCCTGG ATGTAGTGCC ACAGGACATT
GGCCGGGTGC TTCTGAATCT ATTCAACAAT GCGTTTTATT CGATAGCTGC GAAACAGAAA
GGCAGAGCTG CGGACTATGA GCCTGAAATA AGGGTTAGTA CCCGTCGGCA CCCAACTTTC
GTTGAGCTAC GGATACGCGA TAATGGACTC GGCATTCCGC AGACAGTACT CGAAAAGATC
TACCAGCCTT TTTTTACAAC CAAACCCAGC GGTCAGGGCA CCGGCCTGGG CTTATCACTC
AGCTATGACA TTATTACAAA AGGCCATGAA GGTGAATTGA GTGTCGATAC CAGCGAAGGA
CAATTTGCAG ATTTTATGAT CAAACTTCCT TTACCTCCTG CCTAA
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| Protein sequence | MNTHRAHFDH WLKSACARWF GWYTAVFILS VSFSRTSAQP AADKFDHLST KNGLSNNSIN
CILQDREGYM WFGTNDGLNK YDGYSFQVFQ TDPARPAHSL TDNRIMGLCE DPKNRLWVVT
EGAGLHEINK QTGNVTHHPI HADHENWWNN QISIYADRQG VLWLCSYGGL IRYEPERHHF
TLYPSPKREV PVKSVFEDRQ NRFWVTTSQG LYLFDRQTGH FALMPVQKAT DPQPWFGPMY
LDSNDVLWLG AVGKGLFQLD LRHSPLRIVP HATKGTINKY MYLGALHRDQ QGFMWMGTTD
GLQRIDTKTS QAFTYLPNPD ALHNLGSMNV QAVYHDRAGT LWAGTDNGID KQALNTKPFT
TYQIRRSVGI VNLPENKVAS LAIDSRNRVW FSNQENLYRL NLRTNQITEI PASLFGNTPQ
HKNNLHALFQ DGQDKLWIGT WDGLYQLDQL TNRSIKFPTE VAAQFVGRGK NGKIWLSGEG
GAASFDPLNS KFTYYKYNPS DTSGLPEKYI YGMLISQTGD IWLTLRGKGL SRLNPQSGRF
THYRAGMKPG QLNSNEIGTI YEDKSGTIWL GSTRGGLNWF DPKTGKFSHL TTKDGLPSDW
IIGITEDNRG YLWLSTKKGL CRFDPRTRSF RPYDNNDGLP NNDFRVNTVS RSGNSLFFGT
LNGLVRFNPD SIQTDRQPFP VYVTTFKVGD SFLPVTRKQY TLAHHENYLS FEFVALTYGL
PERNQYAYKL SGIDNDWIKN GSRRFASYTN LPAGKYTFQV KAANSDGVWR QLESPLTIQI
LAPWWQTWPA YVLYTLTGLG SMWALATYRS RKLLLANRQL EDIIANRTNE IRRQSDELAL
QRDSLEKTLT ELTSTQRQLI HREKMASLGE LTAGIAHEIQ NPLNFVNNFS EVSTELAGEL
LDLLANGQQA NAATLASYIQ ANLQKINHHG KRADSIVKNM LQHSRFSNGK KFPTNLNKLI
DEHLRLAYQG VRVNDKSITV HLVTDFDPTI GVLDVVPQDI GRVLLNLFNN AFYSIAAKQK
GRAADYEPEI RVSTRRHPTF VELRIRDNGL GIPQTVLEKI YQPFFTTKPS GQGTGLGLSL
SYDIITKGHE GELSVDTSEG QFADFMIKLP LPPA
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