| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0447 |
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| Symbol | |
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| ID | 8724175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 555935 |
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| End bp | 557116 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | Lycopene beta and epsilon cyclase |
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| Protein accession | YP_003385310 |
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| Protein GI | 284035380 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT ACGACTTCAT CATTGCCGGA GGAGGCATGG CTGGTTTAAG CCTTGCCTAT
TATCTTAGCC AGTCACCGCT GCGGAATCAT AGCATTTTGA TTCTTGACCG GGAAATAAAA
AACAGCAATG ACCGGACCTG GTGTTTCTGG GACCGGAAAA AGGGCGTTTC GGGCCGCGAA
CCGGCGCGTA TGAACGCCTT TGAGTCAATT CTTTTCCGTA CCTGGAGCAA AGTGAGCTTT
CATGGAACAA CCCATGCCGG GCTGCTGGAT ATGGGGCCGT ACGACTACAA GATGCTGCGC
GGCATAGACT TCTACGAATT TGTTCAGCGC GAACTGGCCA ATCATCCGAC AATTGAACGC
AGGCAGGCAA CCATCAACCG TATTAAAGAT ACCCCGCAGG GTGGATTCGT TATTGCGGAT
GATGAACCAT ACATTGCCGA CTACGTATTC GACAGCACCT TTTCCCTCAA ACTGGATCAA
TCCGAAAACC ATAACCTGCT CCAGCATTTC AAGGGATGGG TCATCACCAC GGAGAAGCCG
TGTTTTAATC CGCATGAGCC CGAAATAATG GACTTTCGAA TCCATCAGCA TGGCGATTGC
CGGTTCGTGT ATGTACTGCC TTTCACGGAA AAATCGGCAC TGGTTGAGTT TACCCTCTTC
AATGATAAGC TGTTATCTGA ACCAGAATAC GATCTTGAAA TCCGCAATTA CATCGCCCAA
TTCCTGAATA CCGGAGCTTA TGAAATAAGC GAAACAGAGT ATGGCGTTAT TCCCATGTCG
GACGAAGCAA CGCAGGAGAA TCCGTCAGAA CATATTATTC GGATTGGCAC ATCCGGCGGA
TACACAAAAC CCTCGACCGG GTATACCTTT CAGCGAACCC AGCGCTACTT GCAGAGCATT
GTCGATAATC TGGTACAAAC CGGCAAACCC CAACGGCCTG TAAGCTGGTT GAAAAAGCGG
TTTAAACTTT ACGACAGTAT CTTCCTGAAC GTACTCGAAA AGCACCGCCA TCCGGCCGAC
GACATCTTTA CGAGGGTCTA TGCCGGCAAT CCCGGACGCG TTTTCACTTT TCTTGATGAA
GAAACACGCT TTATCGACGA GCTGAGGTTG TTTGCCACGA TGCCGTTTAT GCCATTTCTT
AAGGCTTTGT TTGACGTAAT ACGTCGGAAG CTATTCGGTT AA
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| Protein sequence | MKKYDFIIAG GGMAGLSLAY YLSQSPLRNH SILILDREIK NSNDRTWCFW DRKKGVSGRE
PARMNAFESI LFRTWSKVSF HGTTHAGLLD MGPYDYKMLR GIDFYEFVQR ELANHPTIER
RQATINRIKD TPQGGFVIAD DEPYIADYVF DSTFSLKLDQ SENHNLLQHF KGWVITTEKP
CFNPHEPEIM DFRIHQHGDC RFVYVLPFTE KSALVEFTLF NDKLLSEPEY DLEIRNYIAQ
FLNTGAYEIS ETEYGVIPMS DEATQENPSE HIIRIGTSGG YTKPSTGYTF QRTQRYLQSI
VDNLVQTGKP QRPVSWLKKR FKLYDSIFLN VLEKHRHPAD DIFTRVYAGN PGRVFTFLDE
ETRFIDELRL FATMPFMPFL KALFDVIRRK LFG
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