Gene Slin_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0445 
Symbol 
ID8724173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp553974 
End bp554759 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385308 
Protein GI284035378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA TATACGGAAT ACTGGGACTT ATGGTCGGCA TGTGGCTCCT ACCAGGTCAG 
ACTACGCTGG CCCAACGGGT TGACAGCGAA GACGATTCCT ACTCAACCAT AACAACGTTT
GGTATCACGA CCAATACAAA CTCCGGCATT GTTGGCGGGT TTGCGTTCCG GCAATCTAAA
TTACTATCAT CTTCCCTGTT TGGCCTACCC CAGTATCGCT ATCTGAGCGT TGAACTGGTT
AACGTAAAGC ATCCCAAAGA ACTTCGCTCG TCTATCAATA ACGTTGGTTC GGGCTATCTG
GATGGGAAAG AAAATTATTT GTTTGTATTG CGACCCCAAT ACGGCCGTGA GGTGAAGCTG
TTTCAGCGCA GTTCCGACGA AGGTATCGCT ATCAGTGGCA TTCTGGCGGG AGGGCCGTCT
GTGGGCATTA TTAAACCTTA CTATCTGGAA GTTTCGTATG GCAATCAGAC CAGATCGGTG
CCAGCTTCTC AGGTAAATGG GTTTGCTACC TCGGCAGGGG AGACCGTTAC TGGTGCCGGT
GGCTTTTTTC AGGGTATTGG CGAGTCGAAG TTAACGGTTG GCCTCAACGT AAAAGCGGCA
CTCAGCTTTG AACTCAGCGC CTTTAGAAAT AATACGACAG GGGTAGAAAT CGGCTTTCTG
GCCGAGGCTT TCCCGAATAG AATCATTATC ATTCCTAATT CAAGCCCCAA CGGTAGCCGT
GAGGATGGAA ATCGGAGTTT CTTCACAACG GGCTATATTA CCTTGTTTTT CGGAAGTAAG
AAATAA
 
Protein sequence
MKTIYGILGL MVGMWLLPGQ TTLAQRVDSE DDSYSTITTF GITTNTNSGI VGGFAFRQSK 
LLSSSLFGLP QYRYLSVELV NVKHPKELRS SINNVGSGYL DGKENYLFVL RPQYGREVKL
FQRSSDEGIA ISGILAGGPS VGIIKPYYLE VSYGNQTRSV PASQVNGFAT SAGETVTGAG
GFFQGIGESK LTVGLNVKAA LSFELSAFRN NTTGVEIGFL AEAFPNRIII IPNSSPNGSR
EDGNRSFFTT GYITLFFGSK K