| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0440 |
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| Symbol | |
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| ID | 8724168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 546253 |
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| End bp | 547938 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003385303 |
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| Protein GI | 284035373 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00952484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.789519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA CTATTGCACA TAAATCACTC CGTACACTGG CTCTTGCCGC CCTGCTACTT
AGCGGGCAGG CATGTAAGGA TGTGCTGAAG GAAACTGTAG TCTCGGCTAT TCCGAACGAT
TACATCAATA CACCCAAAGG TTTCGAAGAT GCCAGTAAGG CCGCCTATTC ATCCCTGCGT
AACTTCTACG CATCGGAGCG TGGGCTGACC ATGACCGAGT ATGGTACGGA TATTTACCAG
GCCGGAGCGG ATGGAAGCTA CAAAGGGTTT CACTTTTACG ATACCCAGAT GAATAGCTTC
GTTGATATCA TCCAGCAGGT TTGGGAAGAG CTATATCGGG GCATTAACAC CTGTAATGCT
GTTATCGAGC GTGCACCGGC AGCTACCGTT ACGGATGCTG TAAAAAAACT GCGTGTAGCC
GAAATGAAGT TTCTAAGGGC GCATTATTAC TTTATTCTGG TGCAGCAGTT TGGCGGTGTT
GATCTACGCC TGAAAGAAAC CTTAGGGCCT ACGAAAGTAA CCAGCCGGGC TTCAGAAGCC
GATATATATA AGCAAATCAC AACCGATCTT GAAGCAGCCA TCCCTGATCT AGACCCAAAG
ATGCGCTCAT CTGACTATGG TCGGGCTACC AAAGCGGCCG CCGAACATTT ACTGGCACGT
GTTTATCTGA CCAAAGCAAC GTCGTCGGCT AAAGCGTCTG ATGATTATGC CAAAGCGGCA
ACCCTGGCCC AGAGTGTTAT TGCCAACTAC GGCTTTAAGC TTCTGCCTGA TTTTGCGAGT
GTGTTTGCCC AGGGCAGTGG TGAAATCAAC GATGAGGTCA TCTTCTCCGT TCAGTACACC
TCTGACCCGC TGACCAACAT GAACACGGCC AACACCAATA ACGGTGATGG TAACAAGCTA
CACTTGTACT TTGGTATGCA GTACGATGTG CAGCCCGGTA TGAAACGGGA TATTGCCAAC
GACCGCCCCT TCAAACGGCT TCGTCCAACA ATGTACCTGC TTGAAACCGT TTTCAAAGAT
CGGGTAAATG ACTCCCGCTA CAAGAAAACC TTCAAGGATA CCTGGCTAAG CAACAACCCC
GGTACGAACC TGAACACCTC GTTCGACAAC AGTAAGGCCA AGATGACGCT AAAAGCGGGT
GATACGGCAA TTTACATTCC GGGTGTTGAG TGGTCACTGG CACAGCGGGC CGCCAAGCCT
TATCAGGTTT TGGTACCCAG TGCTTACACA GCCGCTCTTT TCCCAACACT GCAGAAATTC
CTTGACCCGC TCCGTCCTGA CCTGACCTAC GAACAGGGTA GCCGCGATTA CCTGGCGTTC
CGCCTGGCCG AAACGTATTT GATCCTGGCC GAAGCTCAGC TGAAACAGGG TAAAACCACT
GAAGCCGCAG CCGCTATTAA TGCCGTTCGT CGCCGGGCTG CGTGGCCGGG GAAAGAGTCC
GCTATGGAAC TCCAGGCTAG CGACCTCACG ATGGAAACAA TCTACGAAGA GCGTGCCCGC
GAATTAGCCG GTGAGCAAAC CCGTTGGATG GATCTAAAAC GCTGGGGAAT TCTGGTAGAG
CGCGTAAAAA AATACAACCC AGACGGAGCT GTTAACGTAA AAGAAACGCA CAATCTGCGC
CCAATTCCGC AAACGCAGAT TGACCGTACA GAAAATGCAG GGTTCGCACA GAATCCAGGG
TTCTAA
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| Protein sequence | MKSTIAHKSL RTLALAALLL SGQACKDVLK ETVVSAIPND YINTPKGFED ASKAAYSSLR
NFYASERGLT MTEYGTDIYQ AGADGSYKGF HFYDTQMNSF VDIIQQVWEE LYRGINTCNA
VIERAPAATV TDAVKKLRVA EMKFLRAHYY FILVQQFGGV DLRLKETLGP TKVTSRASEA
DIYKQITTDL EAAIPDLDPK MRSSDYGRAT KAAAEHLLAR VYLTKATSSA KASDDYAKAA
TLAQSVIANY GFKLLPDFAS VFAQGSGEIN DEVIFSVQYT SDPLTNMNTA NTNNGDGNKL
HLYFGMQYDV QPGMKRDIAN DRPFKRLRPT MYLLETVFKD RVNDSRYKKT FKDTWLSNNP
GTNLNTSFDN SKAKMTLKAG DTAIYIPGVE WSLAQRAAKP YQVLVPSAYT AALFPTLQKF
LDPLRPDLTY EQGSRDYLAF RLAETYLILA EAQLKQGKTT EAAAAINAVR RRAAWPGKES
AMELQASDLT METIYEERAR ELAGEQTRWM DLKRWGILVE RVKKYNPDGA VNVKETHNLR
PIPQTQIDRT ENAGFAQNPG F
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