| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0439 |
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| Symbol | |
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| ID | 8724167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 545113 |
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| End bp | 546039 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003385302 |
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| Protein GI | 284035372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00988774 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.647818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGAAA CGGTAAACCG ACGGCAATTT CTGACAACGG CAGGCGTTTC GGCCCTGACT
TTACTGGCTG GTACCAATCG GCTGCTTGGC GCTGTTGCCA AACCATCCGG GCTTAAAATC
GCCTATTCGG CTATTACGTG GGGCGGTAAC GATGCCCAGG CCATTACCGA CCTGTCGGCC
TTAGGATACA GGGGTATTCA ACTGCGCGCC AATGCGTTTG GCCCTTATAA AGCCAAACCA
TCGGAATTAA AAGCCCTGCT CGACCAGCAC CATTTGGCAC TAGCCATGTT TTCGAGTGGG
AACGTTGAAA TCGATCCGGC CAAGGAACAG AGCACTGTCG ACATGCACGT GGCTCATGCC
AGCTTTGTAA AGGCGCTGGG AGGCTCAGCC ATTCAGTTAA CCAACTCGGC TCGTCCCAAA
GATCGACTGC CAACGACCGA TGAACTGAAA CGGTTGGCTG CCGTCATGAA CGAAATCGGT
AAACAAACCG CCGACCTGGG GGTGCAGGCC ACCTACCACA ACCACATGCA CCAACTTGGC
GAAACACCCG AAGAAGTAGA TGTGATTATT CAGGCGATGA ACCCTAAGTT CGTAAAACTG
GAACTCGACA TTGCTCATTA CAAGCAAGGC GGTGGCGAGC CCGAAAAAGC CGTGAAGCAA
TACAAAGACA TCATTTACGC GCTTCACCTG AAAGACACCA TGTCGCCCCT GCCAGATAAA
CCGGATAACC CTAAGGCTTA CAAGTTTGTC GAATTAGGAC GGGGTAACGT AAACGTCCCG
GCTGTATTTA AAGCGCTGGA GGAAATAAAG TTCAAAGGAT GGGGCATTAT TGAATTGGAC
GGCGTACCCG AAAAAGACAA GACAGCCGCG CAGTGTGCTC AGATCAATAA AGATTACATT
ACAAAAACAT TAAATTTCCC GCTTTGA
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| Protein sequence | MLETVNRRQF LTTAGVSALT LLAGTNRLLG AVAKPSGLKI AYSAITWGGN DAQAITDLSA
LGYRGIQLRA NAFGPYKAKP SELKALLDQH HLALAMFSSG NVEIDPAKEQ STVDMHVAHA
SFVKALGGSA IQLTNSARPK DRLPTTDELK RLAAVMNEIG KQTADLGVQA TYHNHMHQLG
ETPEEVDVII QAMNPKFVKL ELDIAHYKQG GGEPEKAVKQ YKDIIYALHL KDTMSPLPDK
PDNPKAYKFV ELGRGNVNVP AVFKALEEIK FKGWGIIELD GVPEKDKTAA QCAQINKDYI
TKTLNFPL
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