Gene Slin_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0426 
Symbol 
ID8724154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp530558 
End bp531637 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content53% 
IMG OID 
Productglutamate 5-kinase 
Protein accessionYP_003385289 
Protein GI284035359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.776395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC CAGACGCCGA AACGGGAAAC CCGTATCTTT GCGGCATGAC AAAACCCGTT 
CTTGTTCTTA AATTCGGTAC TGCTTCCATC ACGAAACCCA ATGGTGAGCC GAATGAGCCG
GTTATGGTAG ACATTGCCCG CCAGGTAGCT GCCCTGCATA CGCGCTATCG TATTGTCCTG
GTATCGTCCG GGGCCGTTGG CGCGGGCAAA TCGCTGATTC GTGAATACCG GGGCGATATT
ACCCAGCGTA AGGCCGCAGC CGCAGTTGGT AATCTGCTCT TGCTCAATCA ATACTCCCGT
TTCTTCTCGA TATACGGCAT TTCAATCGCT CAAAGTCTGT GCGAACGACA CCATTTTGCC
GACCGCGACC AGTTCCTTCA GCTAAAACAA ACGTACGAAG AGCTTTGGGC TAATGATCTG
ATTCCCATCG CAAACGAGAA CGACGTCGTG AGCAACCGCG AACTGAAGTT TTCGGATAAC
GACGAACTGG CTACGCTTAT TGCGGTAGGC TTTGGCGCTG AAGCCCTGAT GCTTTGCACG
TCCGTTGGTG GGTTGCTGGA TGCCGACGGC ACCATTATCA GGGAAGTAAA AGACTTCGAC
GAGCGCATAT TCGGCGTAGT TCGAACGGAT AAATCTTCCC TCGGGTTGGG CGGTATGGCC
TCCAAATTAA CCTTCGCCAA GCTGGCTACC CGCATGGGTA TTAGGGTCGT TATTTTTGGG
TTGAGCGAAC CGGATAGTAT CAGGCGGGCC CTTGATCGTG AAGTAGGTAC CGAATTTACA
CCTCAACCCA CCGTTCTCTC TGCCCGAAAC CGGTGGCTCG GCTCAGGAAG CCTGGCAGTA
GGCCGGGTAC AGATCGATGC AGGCGCCGTT CGGGCGCTGC AACAGCGAAG AAGCCTGCTG
GCCGTTGGTG TTCGGGCGAT AGTGGGCGAA TTTGCCACGG GCGAAATGAT TGAAATTCTG
GACGACGAAC AGAAGACAAT CGCCGTTGCC CGCGCCCGAA TTTCGTCCGA AACACTGGCT
CAACAGCTTA ATCAGCAAAA TGTGGAGGTC GCCAATGCGA ATGATATTGT ACTTTTGTAA
 
Protein sequence
MAKPDAETGN PYLCGMTKPV LVLKFGTASI TKPNGEPNEP VMVDIARQVA ALHTRYRIVL 
VSSGAVGAGK SLIREYRGDI TQRKAAAAVG NLLLLNQYSR FFSIYGISIA QSLCERHHFA
DRDQFLQLKQ TYEELWANDL IPIANENDVV SNRELKFSDN DELATLIAVG FGAEALMLCT
SVGGLLDADG TIIREVKDFD ERIFGVVRTD KSSLGLGGMA SKLTFAKLAT RMGIRVVIFG
LSEPDSIRRA LDREVGTEFT PQPTVLSARN RWLGSGSLAV GRVQIDAGAV RALQQRRSLL
AVGVRAIVGE FATGEMIEIL DDEQKTIAVA RARISSETLA QQLNQQNVEV ANANDIVLL