Gene Slin_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0419 
Symbol 
ID8724147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp524166 
End bp524765 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content50% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003385282 
Protein GI284035352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCT CACGCTCCCA AACCGGCCCC GACGACGAAA CCCTCTGGAA TCTGTTCCGC 
GGTGGCGATG AAAATGCGTT TGCCCGATTG TATCAAAATT ATGTTCAAAC CCTCTACCAC
TACTGCGCGC ACTTCGCTAC TGATCGCGCC TTAATTAAAG ATTGCATCCA CGATTTGTTT
GTCGAACTCT GGAAGCACCG GAACACAATA GGTCCAACCA CCTCCGTTCG TTTTTACCTG
ATGGCTTCCA TCAAACGTAA GCTGGTCCGC CACCTGACGG CCGAACAGAA ATTGGTTAGC
CAGGACGATA TGATCAATGG TCGGCGCGTG GGCGATACAC TGCCGGGAGC TGATCCATCA
CACGAAAACC TGCTGATCGC CCATGAAGAG GATTCGTACG TAAATGACTG CCTGCACCAG
GCGCTTGACA AACTTCCCCG CCGTCAGCGC GAAGCCGTTC ATCTGCGGTA TTTCCAGAAT
ATGAGCAACG AAGAAATTTC TGCGCTGATG GAAATCAATA TTCAATCGGT GTACAACTTG
ATATTTGGAG CTATGAGCAA TCTCAAGCGT TATGTTACGC TTGAAAATGT GTCGCTCTGA
 
Protein sequence
MARSRSQTGP DDETLWNLFR GGDENAFARL YQNYVQTLYH YCAHFATDRA LIKDCIHDLF 
VELWKHRNTI GPTTSVRFYL MASIKRKLVR HLTAEQKLVS QDDMINGRRV GDTLPGADPS
HENLLIAHEE DSYVNDCLHQ ALDKLPRRQR EAVHLRYFQN MSNEEISALM EINIQSVYNL
IFGAMSNLKR YVTLENVSL