Gene Slin_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0418 
Symbol 
ID8724146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp522408 
End bp524063 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content51% 
IMG OID 
Productadenine deaminase 
Protein accessionYP_003385281 
Protein GI284035351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.876595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACAG CGAACATCCT AAATCTGTTT GATCAATCTA TTTACTACGG TACCATCGCT 
GTCGAAAACG GGCGCATCAG TCAACTCACT CAACTCGGTC CCGAACGCCC GGATGAGCCC
TATGTGCTTC CGGGCTTTGT TGACGCCCAC GTTCATGTAG AAAGCTCTTT ACTGACACCG
CCCCAGTTTG CGCGTCTGGC GGTTGTGCAC GGCACAGTAG CTACCGTTTC GGACCCGCAC
GAGATTGGAA ATGTGCTGGG CGTTGCCGGT GTAAAGTACA TGATTGAAGA GGCTCGTCGG
GTTCCCTTTA AGTTTATGTT CGGGGCACCT TCCTGTGTAC CTGCCACGAC GTTCGAAACA
GCAGGAGCGA CGATCAGCGC GCAGGATGTC AGGCAATTGC TGGCGATGAA AGAAATTGGT
TACCTGGCCG AGGTGATGAA CTTCCCGGGT GTGCTGCATC AAGACCCTGA CATGATGACC
AAGATTAGTT TGGCCAACGC GTTTAATAAA CCCGTAGATG GACATGCCCC CGGCCTGACC
GGCGACGAAG CTCAACGATA CATAGACGCC GGAATCAGCA CCGACCACGA ATGTTTTACC
TACGAAGAGG GGCTTGACAA AGCCCGGCGC GGGATGAACA TCCTGATTCG GGAAGGTAGT
GCGGCCCGCA ACTTCGAAGC CCTGATTCCG TTGCTGGCTG AGTTTCCGGG TCAGGTTATG
TTCTGTTCGG ATGATAAACA CCCCGATACA CTGGCCGAAG GTCATATTAA TCAACTAGTC
GTGCGCGCTC TTGGCAAAGG TCATTCGCTC TGGCATGTGC TGCGGGCGGC CTGCCTAAAT
CCCGTACTTC ATTACCGAAT GCCGGTTGGA CTCCTGCGCG AAGGCGACCC CGCCGATTAT
ATCGTTGTCA ATAATCTCCG TGAGTTTCAG GTGCAGCAAA CAGTGATCAA CGGAGAAGTT
GTAGCCGAAC GCGGGCAATC GACTATTCCC GATCTGCGCA GTGAGCCTGT AAACCAGTTT
TCCTGTTCGC TCAAAACGCC TGAAGATTTT GTTGTAAAGG CAATCGTTTC GGATGAGCCT
GTATTGATCC GGGTCATAGA AGCGCTCGAC GGACAGCTGA TCACGAACGA GCTGCATCTG
GAAGCGAAGG TCGAAGATGG CCAGCTTGTA CCCGATGTTG AGGGAGATAT ATTAAAGCTG
GTTGTCGTCA ATCGGTATCA GGATACGCCC CCCGCCGTGG CGTTTATCAA AAATTTCGGG
CTTACCTCAG GCGCTCTTGC CTCCTCCGTG GGACATGATT CGCACAATAT AACGGCGGTG
GGTTGTAATG ACGAGAGCAT TTGCAAAGCC ATTAATTTAA TTATTGAAGC AAAAGGAGGC
TTATCGGCTG TGGGAGAGGG GCCTGCTGCC AAATCTATCC TCCTGCCACT ACCCGTAGCG
GGGCTTATGA GCGACATAGA TGGATATACT ATAGCCAAAC AGTATACTAA GTTAGATGAG
TACGCTAAGT ATAAACTTAA AAGTACCCTG TTAGCCCCCT TTATGACCTT ATCATTCATG
GCGCTACTGG TCATTCCTAA GGTCAAACTG AGTGACTTAG GCTTATTTGA TGGCAAAACG
TTCAATTTTG TTCCTCTTCA AATAGTGAAA TCGTGA
 
Protein sequence
MLTANILNLF DQSIYYGTIA VENGRISQLT QLGPERPDEP YVLPGFVDAH VHVESSLLTP 
PQFARLAVVH GTVATVSDPH EIGNVLGVAG VKYMIEEARR VPFKFMFGAP SCVPATTFET
AGATISAQDV RQLLAMKEIG YLAEVMNFPG VLHQDPDMMT KISLANAFNK PVDGHAPGLT
GDEAQRYIDA GISTDHECFT YEEGLDKARR GMNILIREGS AARNFEALIP LLAEFPGQVM
FCSDDKHPDT LAEGHINQLV VRALGKGHSL WHVLRAACLN PVLHYRMPVG LLREGDPADY
IVVNNLREFQ VQQTVINGEV VAERGQSTIP DLRSEPVNQF SCSLKTPEDF VVKAIVSDEP
VLIRVIEALD GQLITNELHL EAKVEDGQLV PDVEGDILKL VVVNRYQDTP PAVAFIKNFG
LTSGALASSV GHDSHNITAV GCNDESICKA INLIIEAKGG LSAVGEGPAA KSILLPLPVA
GLMSDIDGYT IAKQYTKLDE YAKYKLKSTL LAPFMTLSFM ALLVIPKVKL SDLGLFDGKT
FNFVPLQIVK S