Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0414 |
Symbol | |
ID | 8724142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 517825 |
End bp | 518436 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | protein of unknown function DUF820 |
Protein accession | YP_003385277 |
Protein GI | 284035347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.993414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.677151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC TTGACGAAAT TAGTCAGTCG CCCAATCTTC GCGAATTGTT GGACAAGCTC GAACAAACCT GGGCGAAAGA GCAGCGCCGT CGTCATGAAT TCTGGGCGGA TGCTGATGAG GGTGTAAAAG CCGAATTTAT TCTCGGCGAA ATAATTTATC ACTCACCAAT TTATGGCCGT CACTGGATGG CATCCACCAA CATCACGCGT TATTTGATCC CTTATGTGTA TGACAATAAA CTAGGTAAAG TAGGCTATGA GAAAGTAATG GTTCGTATGA CTCGTAATGA CTACGAACCG GATATCTGTT TTTGGCATAC TGAAAAAACA GTTGATTTCG GCCAGAAGCA GTCCGCTTTC CCTCCGCCCG ATTTTGTCGT AGAAATTTTG TCTGACAGCA CAAAAGAAAG GGACTATGGA ATTAAAATGA CAGACTATGC CCTGCATGGG GTTCGGGAGT ATTGGATTGT TGATACAGAG CATGAAACCA TTGAGCAGTA TTTGCTGGAG GGTAATACCT TCATTTTAGC ACAGAAACTT AGAGATGGTA TCCTGGAAGC CGAAACGATT GAAGGCTTTA AAATTGGGGT AAAAGCCGTA TTTGCTGAAT AA
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Protein sequence | MTALDEISQS PNLRELLDKL EQTWAKEQRR RHEFWADADE GVKAEFILGE IIYHSPIYGR HWMASTNITR YLIPYVYDNK LGKVGYEKVM VRMTRNDYEP DICFWHTEKT VDFGQKQSAF PPPDFVVEIL SDSTKERDYG IKMTDYALHG VREYWIVDTE HETIEQYLLE GNTFILAQKL RDGILEAETI EGFKIGVKAV FAE
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