Gene Slin_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0414 
Symbol 
ID8724142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp517825 
End bp518436 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID 
Productprotein of unknown function DUF820 
Protein accessionYP_003385277 
Protein GI284035347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.993414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.677151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC TTGACGAAAT TAGTCAGTCG CCCAATCTTC GCGAATTGTT GGACAAGCTC 
GAACAAACCT GGGCGAAAGA GCAGCGCCGT CGTCATGAAT TCTGGGCGGA TGCTGATGAG
GGTGTAAAAG CCGAATTTAT TCTCGGCGAA ATAATTTATC ACTCACCAAT TTATGGCCGT
CACTGGATGG CATCCACCAA CATCACGCGT TATTTGATCC CTTATGTGTA TGACAATAAA
CTAGGTAAAG TAGGCTATGA GAAAGTAATG GTTCGTATGA CTCGTAATGA CTACGAACCG
GATATCTGTT TTTGGCATAC TGAAAAAACA GTTGATTTCG GCCAGAAGCA GTCCGCTTTC
CCTCCGCCCG ATTTTGTCGT AGAAATTTTG TCTGACAGCA CAAAAGAAAG GGACTATGGA
ATTAAAATGA CAGACTATGC CCTGCATGGG GTTCGGGAGT ATTGGATTGT TGATACAGAG
CATGAAACCA TTGAGCAGTA TTTGCTGGAG GGTAATACCT TCATTTTAGC ACAGAAACTT
AGAGATGGTA TCCTGGAAGC CGAAACGATT GAAGGCTTTA AAATTGGGGT AAAAGCCGTA
TTTGCTGAAT AA
 
Protein sequence
MTALDEISQS PNLRELLDKL EQTWAKEQRR RHEFWADADE GVKAEFILGE IIYHSPIYGR 
HWMASTNITR YLIPYVYDNK LGKVGYEKVM VRMTRNDYEP DICFWHTEKT VDFGQKQSAF
PPPDFVVEIL SDSTKERDYG IKMTDYALHG VREYWIVDTE HETIEQYLLE GNTFILAQKL
RDGILEAETI EGFKIGVKAV FAE