Gene Slin_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0401 
Symbol 
ID8724129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp506051 
End bp506788 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content54% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003385264 
Protein GI284035334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.679351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAC AAAACAAAGT TGCCATTATT ACCGGAGCCG CCCGGGGTAT AGGACAGGCT 
GCCGCCGAAG TATTTTGTCG GGAAGGCGCC ACGGTTATCA TCTGGGATTT GCTGAATGAA
GGAGAGGCTA CGGCTCAGTC ACTGCGCAAC CAGGGATTTG CGTGCACGTT CCAGCATGTC
AGCACAACCG ATGTGCCCGG TATTGAAGCA GCCGCCCGTT CTGTACACGA GCAGTATGGT
CGGATTGATA TTCTGATTAA CAACGCCGGG ATTACTCGGG ATAAAACCCT GCTGAAAATG
TCGTTTGCCG ACTGGCAGCA GGTGATCGAC GTAAACCTGA CGGGTGTTTT TAACTGCACA
AAAGTTGTAG CACCCTACAT GGTGGAGCAG AAATACGGAC GTATCATCTG TACCTCCTCG
ATCAACGGGG TGCATGGTGC CTTTGGCCAA ACAAATTATG CCGCTGCTAA AGCGGGAATT
ATCGGCATGG TACGGTCCTG GGCCAAAGAG CTAGGCCCGA AAGGAATTAC GGCCAATGCG
GTGGCACCGG GTTTTATCCA AACGGCCATG ACCGACGCCA TGCCCGACGA GGTGCGCAAC
CAGGCCGTGG CAACCATTCC GGTTCGGCGC ATTGGCAAAC CGGAAGACAT CGCCAACGCA
TATCTGTTTC TGGCGTCCGA CGAAGCTTCA TTTGTGAACG GACACGTATT GTCGGTCAAT
GGCGGGCAGG CGTTGTAG
 
Protein sequence
MRLQNKVAII TGAARGIGQA AAEVFCREGA TVIIWDLLNE GEATAQSLRN QGFACTFQHV 
STTDVPGIEA AARSVHEQYG RIDILINNAG ITRDKTLLKM SFADWQQVID VNLTGVFNCT
KVVAPYMVEQ KYGRIICTSS INGVHGAFGQ TNYAAAKAGI IGMVRSWAKE LGPKGITANA
VAPGFIQTAM TDAMPDEVRN QAVATIPVRR IGKPEDIANA YLFLASDEAS FVNGHVLSVN
GGQAL