Gene Slin_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0387 
Symbol 
ID8724115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp490138 
End bp490707 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID 
Productprotein of unknown function DUF1452 
Protein accessionYP_003385250 
Protein GI284035320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.671776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTA GTTCATTCAC CAAATTTTTC GAGCGGTTTG CCTCCCGGGC AACGCAGGCT 
ACCGGCTCTT CAACCGCCTT TCTACTGGCC TTATTGACAA TTATCACCTG GATTATTACA
GGGCCTATTT TCGGTTATTC AGACACCTGG CAACTTGTTA TCAATACAGG CACAACGATC
ATAACTTTCC TTATGGTCTT TCTGATCCAG AAGTCGCAGA ATAAGGATTC GCTGGCCATG
CAGCTCAAGC TGAACGAACT CATTGCCGTA AATCGTAAGG CCAGCAACCG ACTACTCAAT
GTAGAAGATC TCACCGAAGC CGAACTGCAT GCATTACACC GCTTTTTCGG TCAGCTGGTC
GAAAAGGCAA AAACAGAATC CAGCCTATCT CAATCACACT CGGTAGAAGA AGCCGAAGAT
ATCCATCAGG ACAAACTCGA TGCGCTGCAC GAACGGCAGT CAGCCCGCCG AAAAGATAGA
CAAGTCGAAA AATCAATGTC AGCGGGCACC TTAAAAGCGC CCGCCAAAAC CCGATCAGTC
AATAAAAAGC ACGTCGATAA GAAAAGCTGA
 
Protein sequence
MASSSFTKFF ERFASRATQA TGSSTAFLLA LLTIITWIIT GPIFGYSDTW QLVINTGTTI 
ITFLMVFLIQ KSQNKDSLAM QLKLNELIAV NRKASNRLLN VEDLTEAELH ALHRFFGQLV
EKAKTESSLS QSHSVEEAED IHQDKLDALH ERQSARRKDR QVEKSMSAGT LKAPAKTRSV
NKKHVDKKS