Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0386 |
Symbol | |
ID | 8724114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 487899 |
End bp | 489923 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003385249 |
Protein GI | 284035319 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.963585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.451057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGGC CTTTTGCTGC TAAATCTACT TCATTGTTAC CCGACGAAGA GGTTCTACTT TTACGTTCGT ACGATCAATT ACAAACAGCG CTTAGCATTG GCCTGATTGC TACCTGGTTT TGGGATCTGG GTACAGACAA CGTACTTGGC GACCCTAACC TTTTGCGCAT GTTCGGCATT CACGAAAGTG CCGAAAGAAC CAGCCTTCCC CTGCGTGTAT TTACCGACTC CATACACCCC GACGATCGAC CCAGAGTAAT CCAGCTGATC GATCAGGGCG TACAGTCCGG CCGTCCTTAC GAAGCGGAAT ACCGCATTGT GGTAAATAAC CAAACCCGTT GGGTGCTTGC CAGAGGGCGG TTAACCTATA CAGACACCCA ACAACCGTTT GCCTTTTCGG GCGTACTGGT CGATGTAACG GACCGGAAGG AAGTTGAACT GCGCTCGCAA ATTGCCGAAA CAAGTTTCCG GCTATCGGTC GAATCGGCTC GTATGGGCAC CTGGGACTAT AGTCCGCTTA CGGGGACATT GATCTGGTCT GACCGGACAA AAGAGCTGTT TGGCCTGCCT CCAACGGCAA CCATCGACTA TAGCGTCTTC TTGCAGGGGC TTCATGCGGA TGATCGTGCG CGAACAGATC AGATGATTCA GGCGGTGCTT CAACCCGGCA GCAGTGGTCG CTTTGACTGC GAATACCGAA CGCTGGGCAT TGAGGATAAG CAGTTACGCT GGGTTCGTGC CAACGGCCAG GCCTTGTTCA ACGAACAGGG TATTGCCAAT CGGTTTATCG GTACCGTTAT CGATATAACC GCTGATAAAG AAGCGGAATC GCTGCTGCAA CGACGCGTGG ATGAGCAAAC CCGTATTCTG GAACAACAGG CACTTGAGCT ACGCACAACC CTGGATGCAT CGCTTAACAG CATCATTGCC ATGACGGCCA TACGGGATGA AACGGGAACT ATTGTTGACT TTATGATGAA CACGGCTAAC GAAGCCGTTA TCAAGAGCAA CTTCATGACA CCCGATCAAA TCATCGGCCG AACAATGTTA ACTGTGTTTC CGGGCAATAA AGACAGCGGT TTTTTCGACC TCTACGCGCG GGTTGTCGAA ACCGGTCAGG CCGAACAGAG CAGCCAATAC TACCGCGATG AGTTCGGGCT GGAAGGCTGG TTTGAGGTGT CGGCCGTTAA GCAGGGAAGC AACGGGGTGG TGATTACCTA CAATAACATC ACCGACCGCA AGCAGGCTGA ACTGGCCGCC CAGCTTCAGG AGCGGGAGTT GAAAGATGCC AACGTTGAGC TACAGCGCTC CAACGAGAAC CTGCAGCAGT TTGCCCATAT CGCTTCGCAC GATTTACAGG AACCACTCCG GCGAATCCAG GCATTCAGCG ATATTCTACA GAATCAGTTT GTGGATAGTC TCTCTGATGG CGAACGGGAC ATGGTTCGTC GTATTCAGAA GTCGGCGCAG CGAATGCAGA TGCTCATTAA AGATTTGCTG CTTTATTCGC AGGTGAGTAC CCAACGGGAT TCGTTCACGA TTGTCTCGCT GGATATCGTC CTCGAAGATG TGGTAACGGA TCTGGAAATG ACCATCGCCG AGAAAAACGC AACGGTCGAT GTATCTCCTC TCCCATCGGT GTACGGAAGC GCGTCGCGGC TGCGTCAGCT TTTCCAGAAC CTGATTACCA ACGCGCTGAA ATTCTGTCAG ACAGGTGTTC CCCCGCTCAT TGAGATACGG TACCGTACCG CCCAACCAAG CGAACTCCCC CCGGTTCTCC TGAACGATTC CAATCAGGCC TTCTGGTTAA TCACCGTTAC CGACAATGGT ATTGGATTTG ACGAACGCTA CAAAGACCGG ATTTTCACCC CATTTCAACG ACTGCACAAG ACCTCCTATA GCGGAACCGG CATTGGCCTG GCCATTTCGC AGCGCGTGAC CGAAAGTCAC GGCGGGGCAA TCGACGTAAC CAGTCAGGAC GGAAAAGGGT CTACGTTTAA GGTTTTCTTG CCCGTTGTCA ATTAA
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Protein sequence | MNRPFAAKST SLLPDEEVLL LRSYDQLQTA LSIGLIATWF WDLGTDNVLG DPNLLRMFGI HESAERTSLP LRVFTDSIHP DDRPRVIQLI DQGVQSGRPY EAEYRIVVNN QTRWVLARGR LTYTDTQQPF AFSGVLVDVT DRKEVELRSQ IAETSFRLSV ESARMGTWDY SPLTGTLIWS DRTKELFGLP PTATIDYSVF LQGLHADDRA RTDQMIQAVL QPGSSGRFDC EYRTLGIEDK QLRWVRANGQ ALFNEQGIAN RFIGTVIDIT ADKEAESLLQ RRVDEQTRIL EQQALELRTT LDASLNSIIA MTAIRDETGT IVDFMMNTAN EAVIKSNFMT PDQIIGRTML TVFPGNKDSG FFDLYARVVE TGQAEQSSQY YRDEFGLEGW FEVSAVKQGS NGVVITYNNI TDRKQAELAA QLQERELKDA NVELQRSNEN LQQFAHIASH DLQEPLRRIQ AFSDILQNQF VDSLSDGERD MVRRIQKSAQ RMQMLIKDLL LYSQVSTQRD SFTIVSLDIV LEDVVTDLEM TIAEKNATVD VSPLPSVYGS ASRLRQLFQN LITNALKFCQ TGVPPLIEIR YRTAQPSELP PVLLNDSNQA FWLITVTDNG IGFDERYKDR IFTPFQRLHK TSYSGTGIGL AISQRVTESH GGAIDVTSQD GKGSTFKVFL PVVN
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