| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0379 |
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| Symbol | |
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| ID | 8724107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 479285 |
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| End bp | 480277 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | putative integral membrane protein; putative sugar permease |
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| Protein accession | YP_003385242 |
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| Protein GI | 284035312 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.791087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATCA TCTCTCACTA TCCAGTGGCA GTTGTTGGCT GCTTTCTGGC AATGCTGTGC
TGGGGCTCCT GGGCTAATAC TCAGAAATTG GCTACTCAAT CTGTCCCCAC AACTATTTTC
TACCGAGATT ATACATACGG AATACTGATT TTGAGCTTGT TAGTGGCATT AACGCTGGGC
AGCCTTGGTA CAGAAGGACG TTCCTTTCTG ACCGATTTCA AGCAGGCCGA CACCGGAAGT
TTTATCTACG CACTGCTGGG CGGGCTGGTT TTTAACGTTG CCAATATGCT TATCGTCATT
GGTATTGAGC TGGCAGGGTT GTCGGTAGCT ATGCCGGTTG GGATTGGACT TGCCCTAATC
CTGGGTGTGA TCGTTAATTA TATATCCTCG CCGATAGGTA ACATAAATCT GCTGTCGGGC
GGGGTTTTCG CCATCTTTCT GTCTATCGTA TTCAGTGCGC TGGCCTACCG TGCCAAAACA
GCCGATGAAG GGTCTGTTAG TACGCAGGGG CTGACAATCT CGCTGGTAGG CGGGTTTATG
ATGAGCTTCT TTTTCTTCTT TGTCGCCCGC GCTATGGCGA GTGATTTTAG CAATCCGGCA
CCGGGGTTAC TGACACCCTA CACGGCACTG GTTCTGTTTG CCGTTGGTGT AGTGGCGAGT
ACTCCGCTGT TTCTCCCTAT TCTCCGCCGA TACGCAAGCA AACCCGCCGA TGGCGAAATT
GACTATGGCG ATGTGAGTCG GCGAAATCAT CAGATTGGTA TGCTGGGCGG TATGATCTGG
TGTCTGGGTA TGGCATCGAG TCTGATGGCG TCGGGTCAGG CTGGGTATGC CATCAGTTAC
GGGCTGGGCC AGGGAGCGAC CATTGTGGCT GTTTTGTGGG GTGTGTTCAT CTGGAAGGAA
TTTCGGGGGG CTCCGGCAAT GTCGGGCCGC TATCTGACGC TGATGGGGGT GTGCTACTTG
CTCGGCCTAA CCCTCATTAT ATACGCCAGA TAG
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| Protein sequence | MFIISHYPVA VVGCFLAMLC WGSWANTQKL ATQSVPTTIF YRDYTYGILI LSLLVALTLG
SLGTEGRSFL TDFKQADTGS FIYALLGGLV FNVANMLIVI GIELAGLSVA MPVGIGLALI
LGVIVNYISS PIGNINLLSG GVFAIFLSIV FSALAYRAKT ADEGSVSTQG LTISLVGGFM
MSFFFFFVAR AMASDFSNPA PGLLTPYTAL VLFAVGVVAS TPLFLPILRR YASKPADGEI
DYGDVSRRNH QIGMLGGMIW CLGMASSLMA SGQAGYAISY GLGQGATIVA VLWGVFIWKE
FRGAPAMSGR YLTLMGVCYL LGLTLIIYAR
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