Gene Slin_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0374 
Symbol 
ID8724102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp474289 
End bp475155 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content50% 
IMG OID 
Productperiplasmic ATP/GTP-binding protein 
Protein accessionYP_003385237 
Protein GI284035307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATT TTAACTTATT TGTACTCCTT TCCACTGTTA GCCTGGGTTT GGTTGCGCTG 
ACTCCGCCCG TCCGGCCGAA ACCTGTGAAG CTGGTTAAAG TCTGGGAAAC GGACAGCACC
TTACGCACCC CCGAATCGGT ACTGTATGAT GGTAATAACA CTTTATACGT TGCCAATATC
GACGGTAAAC CCGATGGGCT CGATGGGAGC GGGTTCATCT CCAAAGTGAC GCTGGACGGT
AAAATTGAAA ACCTGCGCTG GACCTCGGGT CTAAATGCGC CCAAAGGCAT GGGATTGCAT
AAAAATCGCC TTTACGTAAC GGATATTTAC CGGCTGGTGT GCATCAATAC GCTAACCGGC
CAGGCCGAAA AAACCTGGGA TGGCGTTGGT AAAGACGCTT TTCTGAACGA TGTGACCGTA
GCAAAAGACG GAACCGTGTA TGTATCGGAT AACCGTAATG ATAAAATTTA TCGGTTGAAA
GATGATAAGT GGGAGGTTTG GCTGGAAGGC GAGCAGCTCA ACAAACCGAA CGGTGTACTG
GCCGTTGGCA AAAACAAACT GATGATCGGC AGCACCAAAA TCGGGGCGTT GCGTACGGTG
GATGTAGATA CCAAAGCTAT TACCACACTG GCCGATGGAA TGGCGGCTAC GGATGGCATT
GTGCCGGAAG GAAAGGGAAA TTACTTCGTA TCGGACTGGA ACGGGCAGCT GTTCCATGTA
AACGCCGATG GCACGAAAGA GCAACTCATG GATACCCGCG GACAGAAGAT CAATTCGGCC
GATATCGAGT ACGTCGCCAA TAAGAAATTA TTAGTTGTGC CGACCTTTTA CCGGAATACG
CTGGTTGCGT ATCGGGTGGA GCAATAA
 
Protein sequence
MKHFNLFVLL STVSLGLVAL TPPVRPKPVK LVKVWETDST LRTPESVLYD GNNTLYVANI 
DGKPDGLDGS GFISKVTLDG KIENLRWTSG LNAPKGMGLH KNRLYVTDIY RLVCINTLTG
QAEKTWDGVG KDAFLNDVTV AKDGTVYVSD NRNDKIYRLK DDKWEVWLEG EQLNKPNGVL
AVGKNKLMIG STKIGALRTV DVDTKAITTL ADGMAATDGI VPEGKGNYFV SDWNGQLFHV
NADGTKEQLM DTRGQKINSA DIEYVANKKL LVVPTFYRNT LVAYRVEQ