| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0361 |
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| Symbol | |
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| ID | 8724089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 460618 |
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| End bp | 463494 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003385224 |
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| Protein GI | 284035294 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.988146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTGA CTTATTTCAT CAACAACGCT ATGAGGTCAC GTTTCTACAC GGTTTTTCTT
TTCATTTTTC TGCTGGCACC GGCCTTTGGC CAGGTCGTTA CTAGCCAACC AACATTCCCC
ACGGCCGACG CCGAGATCAC CCTTATTTTC GACCTGACGA AGTCAACCGA TAGTCGGGCA
AAGGGGCTGC TGGGTAAACA GGACGATGTT TATTTATGGT CGGGGGCCGG GTCGACAGCG
AGCGGAAATG CGTTCGAGTT TCAACCCACC GGCCAAACTG ATTTTAATAA GGTATTTACA
CCGGGTAAAA TGACCGCTTT GGGCGGGGAT AAATGGCAGA TTAAACTGGT ACCCCGCACC
TACTTCGGTG TGCCGACCGG AACGCCCATT CGAAAACTTG GCCTGTTGCT GAAAAGTGGG
GACGGGAAAG CACAAACGGA AGACCTGTTC GTCAGCATTT ACGACGCGAG TTTTAACCTG
ACCCGGTTAG CACCGAATCA AAAACAGTTT TATGTCGATG CCGATACGCC TTTGCCGGTA
CGCTACAAAA GCTCGCAGTC GGCAACGTTC AGCCTGACAC TGGATGGGCA ACCGACGGCC
AGTTCTACTG GTTCCGATTC ACTCAATATC AGACTGAACA CCGGCAACCA ATCCGGTTTG
CTGCGAACAG TCATTGTCCG GGCAACTTCG CTGAGCGCAA CGACCGGCAT CAACGCCCTT
GCCGACACGT TTTACTTTAC GGTGAAACCG TTGCCCACTG TGGCTACACT GCCAGCGGGT
TTACAGGATG GCATCAATTA CACCGGCCCC AACAAGGCAA CGCTGGTATT GTACGCACCG
AAGAAAAGTT TTGTGTACCT GCTCGGCGAG TTCAACAACT GGGCCGTTGA CCCGGCGTAC
CTGATGAACC GGACGCCCGA CGGTACCCGA TACTGGCTCG AACTCCCTAA CCTGCCCACC
GGCGAAACGG CCTTCCAGTA TCTGGTCGAC GGAACCATCG GTGTCGCCGA TCCCTACGCC
GACAAGATTC TCGACCGGAA CAACGATAAA TTTATTCCGG CAACGACCTA CCCTAACCTG
AAAGCCTTCC CCGAAAAAGC ACAGGGCAAT ACGGTATCTG TTCTTCAGCC CGGCCAAACG
CCTTACGTGT TTCAAACGAC CGGTTTCCAG CGGCCCGCCG TTAATACAAT GGTCGTTTAT
GAGTTACTGG TTCGTGATTT CGTCCAGAAC CGGAGCTACC AAACCCTTAC CGATAGTCTG
GCCTATCTGA AACGGCTCGG CATCAACACC ATTGAGCTGA TGCCTGTTAC GGAGTTTTCG
GGCAATGATT CGTGGGGGTA CAACCCGACG TTCTATTTCG CCCCTGATAA AGCCTACGGG
ACCAAGACGG CCCTCCGACA GTTTATCGAC GCGGCCCACA AACAGGGCAT TGCCGTGGTG
CTGGACATGG TGCTGAATCA GGCTGACTAC GAGTTTCCGT ACGTAAAAAT GTACTGGGCC
GGTGACCGCC CTTCGGCAGA CAGCCCTTAT TTCAACCAGC AGGCCACGCA TCCGTACAGC
GTCTTTTTCG ACTTCAACCA CGAAAGCCCG GATACCAAAG CCTTTGTAGA CAGGGTTTGT
AAATACTGGT TGCAGGAATA TAAGATAGAC GGCTTCCGAT TTGATCTGTC GAAAGGATTC
ACGCAGAAAA ACTCGGGCAA TGATGTGTCT GCCTGGGGAA ACTACGATGC CGGCCGGATT
GCGATCTGGA AACGCATTTA TGACCAGATT CGTACTGTAG ACCCAACCGC CTACGTTATT
CTCGAACACT TCGCCGACAA TGCCGAAGAA ACGGAGCTGG CTAATTATGG AATGCTACTC
TGGGGAAATC ATAACGGCGA TTTTCGGGGG GCAGCGCGCT CCGCACAAGG CGACTTCTCG
GGTATTTCGT ATCAGAAACG CAACTTCCAA AAGCCAAATC TGATCGGCTA CACCGAAAGT
CACGACGAAG AACGGCTCGT TTATGACCTC CGCCAGAATG GAGCCGCAAC GGGTTCGTAT
ACCATTAAAT CGCTACCAAC GGCGCTCGAT CGGGCCAAGC TGACGGCTGC GTTTCTGCTG
ACGGTGCCGG GGCCAAAAAT GATCTGGCAG TTCGGCGAGC TGGGGTACGA TCTATCCATC
AACACCTGCT CCGACGGTAC GACCCTAAAA GACGACTGCC GAACAGCGGC TAAACCTGTC
CGCTGGACTT ATTATCAGGA CGCGGACCGG CAGAAATTGT ATAAAGTTTA CAGTGCCCTG
ATCAACCTCA AAACAACGGT TCCTGCCTTT GCCACCGCTG ATTTTACCAC CGATTTTACG
GGCGTGGTGA AGCGGCTAAC CTTGCGCAGT GCCTCAGGAA CCGTTTTCCT GATTGGCAAC
TTCGATACGA AAGCGCAGAC TGTTTCTGCC GGGTTTCCAG CGGGCGGAAA ATGGTTTCAT
TTCTTCACCG GGCAGGAGGT GCAGATTGCC GACGCTAATC AATCGGTTAC GCTGGAGCCG
GGCGCGTTTC ACCTCTATTC AACGACCAAA TTACCAACGC CCGAAGCAGG GCTTGTTCCC
TTTGCTTTGG TACCGGGTGT CGTAACAGCG GTTGAACCGG AACCCGACAG CCAGCTAGTC
ATTTCGCCAA ATCCGGCGAC GGAACAGACG ACGGTGGAAA TAAACAGCCG GTACCGGGGT
GGTGTAGCGT TCGACCTGCG CGAATCGGGT GGTCGATCAA TCCGGTCCTG GAACGCGCCC
AAAACCAGCG ACCGATTCCA CCAGCCAATC GACCTGCAAC ACCTGCCTAC CGGAATCTAT
TTTCTCCAAA TTCAGCAGGG CGAGCGACAA AGCACCTTGA AAGTATTGAA GCACTAA
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| Protein sequence | MFVTYFINNA MRSRFYTVFL FIFLLAPAFG QVVTSQPTFP TADAEITLIF DLTKSTDSRA
KGLLGKQDDV YLWSGAGSTA SGNAFEFQPT GQTDFNKVFT PGKMTALGGD KWQIKLVPRT
YFGVPTGTPI RKLGLLLKSG DGKAQTEDLF VSIYDASFNL TRLAPNQKQF YVDADTPLPV
RYKSSQSATF SLTLDGQPTA SSTGSDSLNI RLNTGNQSGL LRTVIVRATS LSATTGINAL
ADTFYFTVKP LPTVATLPAG LQDGINYTGP NKATLVLYAP KKSFVYLLGE FNNWAVDPAY
LMNRTPDGTR YWLELPNLPT GETAFQYLVD GTIGVADPYA DKILDRNNDK FIPATTYPNL
KAFPEKAQGN TVSVLQPGQT PYVFQTTGFQ RPAVNTMVVY ELLVRDFVQN RSYQTLTDSL
AYLKRLGINT IELMPVTEFS GNDSWGYNPT FYFAPDKAYG TKTALRQFID AAHKQGIAVV
LDMVLNQADY EFPYVKMYWA GDRPSADSPY FNQQATHPYS VFFDFNHESP DTKAFVDRVC
KYWLQEYKID GFRFDLSKGF TQKNSGNDVS AWGNYDAGRI AIWKRIYDQI RTVDPTAYVI
LEHFADNAEE TELANYGMLL WGNHNGDFRG AARSAQGDFS GISYQKRNFQ KPNLIGYTES
HDEERLVYDL RQNGAATGSY TIKSLPTALD RAKLTAAFLL TVPGPKMIWQ FGELGYDLSI
NTCSDGTTLK DDCRTAAKPV RWTYYQDADR QKLYKVYSAL INLKTTVPAF ATADFTTDFT
GVVKRLTLRS ASGTVFLIGN FDTKAQTVSA GFPAGGKWFH FFTGQEVQIA DANQSVTLEP
GAFHLYSTTK LPTPEAGLVP FALVPGVVTA VEPEPDSQLV ISPNPATEQT TVEINSRYRG
GVAFDLRESG GRSIRSWNAP KTSDRFHQPI DLQHLPTGIY FLQIQQGERQ STLKVLKH
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