Gene Slin_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0353 
Symbol 
ID8724081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp448588 
End bp449628 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content50% 
IMG OID 
ProductXylan 1,4-beta-xylosidase 
Protein accessionYP_003385216 
Protein GI284035286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACCT CAACTAAAAG TATCCTTGTT GCCGTAGCGC TGATCTGCGT TGGCATCAGT 
AATGGCATCT GCCAGACTAC AAAACCCAAA CCACTGGTTA CGGATCTGTA CACGGCTGAT
CCGTCGGCAC ACGTATTTAA CGGGAAGATC TACATTTATC CATCGCACGA TATTGAGGCT
AATGTGCCGG AAGATGACGA GGGCGGGCAC TTCAACATGC GCGACTACCA CGTTTATTCG
ATGGATAACA TCAATGGTAA GGTAACTGAT CATGGCGTGG CGCTGGATAT TAAGGATGTG
CCCTGGGCAG GTCGGCAGAT GTGGGCCCCC GATGCCGCTT ACAAAAACGG AACCTACTAC
CTATACTTCC CGGTGAAGGA TAAGAACGAT GTGTTCCGCA TGGGAGTAGC AACCAGCAAA
TCGCCGACGG GCCCGTTTAA AGCCCAACCC GCTCCCATAC CAGGCAGCTA CAGTATTGAC
CCGGCAGTGT TTACCGATAC AGACGGAACA ACCTATATGT ATTTTGGCGG TATCTGGGGC
GGTCAGCTGC AGCGCTGGGC AACCGGCAAG TATAATAAAG CGCTGAAGAC TGATCTGGGG
AAAGATAACG AGCCTGCCCT GAGTGCTAAA GTTGTTCGGA TGAATAAGAA CATGCTCACC
TTCGACGAGC CGGCCAAAGA TGTGAAGATT ATCGACAAGA ATGGTAAGCC GCTGCTGGCG
GGCGACCATG ATCGGCGTTT CTTTGAAGGT GCCTGGATGC ATAAGTACAA AGGGAAATAT
TACTTCTCGT ACTCAACCGG CGATACGCAT TTTCTGGCCT ATGCTACCAG TAATTCACCC
TACGGACCCT TTACTTATCA GGGTACATTC ATGAAGCCTG TTACCGGCTG GACAACGCAT
CACTCTATCG TTGAATTCAA AGGAAAGTGG TACATTTTCT ACCACGATGT TGAGCGATCG
GGCAAAACAC ATTTACGCAA CATCAAGGTG CGCGAACTGA TGCGCAAACC CGATGGTTCG
CTGGAGATGA TTACGCCCTA A
 
Protein sequence
MFTSTKSILV AVALICVGIS NGICQTTKPK PLVTDLYTAD PSAHVFNGKI YIYPSHDIEA 
NVPEDDEGGH FNMRDYHVYS MDNINGKVTD HGVALDIKDV PWAGRQMWAP DAAYKNGTYY
LYFPVKDKND VFRMGVATSK SPTGPFKAQP APIPGSYSID PAVFTDTDGT TYMYFGGIWG
GQLQRWATGK YNKALKTDLG KDNEPALSAK VVRMNKNMLT FDEPAKDVKI IDKNGKPLLA
GDHDRRFFEG AWMHKYKGKY YFSYSTGDTH FLAYATSNSP YGPFTYQGTF MKPVTGWTTH
HSIVEFKGKW YIFYHDVERS GKTHLRNIKV RELMRKPDGS LEMITP