| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0351 |
|---|
| Symbol | |
|---|
| ID | 8724079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 445898 |
|---|
| End bp | 446998 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | Endo-1,4-beta-xylanase |
|---|
| Protein accession | YP_003385214 |
|---|
| Protein GI | 284035284 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TACTTTACCT GAAAAACCAG ATTGGATATA TAGTACTGCT GGGTAGTATG
GGGCTGTTCG GCATGGGTCT CAATCCGGGA CCAACTGCCG AGCCAACCCT AAAAGAAGCG
TACAAAAAGT ACTTCCCTAT CGGTGTAGCC GTAGCACCGC GCAACCTGAC AGGACCGGAA
TCTGAGCTAA TTGTTCAGCA ATTCAACAGT GTTACGCCCG AGAATGCCAT GAAAATGGGG
CCTATTCACC CCGAGGAAAA TCGGTATTTC TGGAAAGATG CCGATGCCAT TGTCGAGTTC
GCGCAGAGAA ATGGCATCAA AGTACGTGGG CACAATCTAT GCTGGCACAG CCAGGCGCCC
CGCTGGTTTT TCACAGACTC GCTGGGTAAG CAGGTAAGCA AAGAGCTACT TCTGAATCGG
ATGAAACGGC ACATTACCGA TGTCGTTACC CGCTACAAAG GGAAAATATA CGCCTGGGAT
GTGGTTAATG AAGCGGTGCC CGACACGGGT ACGGGTGTAT ATCGAAGATC GAAATTCTAC
GAGATTTTAG GGGACGAGTA CATCGAGAAA GCCTTCGAAT ATGCGCACCA GGCCGACCCG
GAGGCCCGGC TCTATTACAA CGATTACAAT ACTGAAAATG CCGCAAAGAG GGCTAAAATC
TACCAGCTGG TTAAGAAATT GACGAGCAAA GGGGTTCCCA TTCATGGCGT TGGCCTGCAG
GGGCATTGGT CTATCTATGA GCCGACCGTT CAGGAGCTGG AAACATCGAT CAAGCAGTTT
GCCAGTCTTG GACTGGCCGT GCAGATAACG GAGCTGGACG TGTCGGTTTA CCCAAAAGAG
CACGAACGCC GTGAAAAGCG AGCAACCGAT ACGAGCGAGT TTACGCCCGA AATGAACGAA
AAGCAGGCCG CTCATTACAA AATGCTGTTC GACGTGTTTC GAAAACACAG GAAGACGATC
ACGAACGTTA CTTTCTGGAA TGTATCCGAC AAAACATCGT GGCTCGATAA CTTTCCGGTT
CCGGGTCGCA AAGATTACCC GCTGCTGTTC GACCAGAGTT ACCAGCCTAA GAAAGCTTTT
TGGAGCGTCG TTAACTTCTA A
|
|---|
| Protein sequence | MKKLLYLKNQ IGYIVLLGSM GLFGMGLNPG PTAEPTLKEA YKKYFPIGVA VAPRNLTGPE
SELIVQQFNS VTPENAMKMG PIHPEENRYF WKDADAIVEF AQRNGIKVRG HNLCWHSQAP
RWFFTDSLGK QVSKELLLNR MKRHITDVVT RYKGKIYAWD VVNEAVPDTG TGVYRRSKFY
EILGDEYIEK AFEYAHQADP EARLYYNDYN TENAAKRAKI YQLVKKLTSK GVPIHGVGLQ
GHWSIYEPTV QELETSIKQF ASLGLAVQIT ELDVSVYPKE HERREKRATD TSEFTPEMNE
KQAAHYKMLF DVFRKHRKTI TNVTFWNVSD KTSWLDNFPV PGRKDYPLLF DQSYQPKKAF
WSVVNF
|
|---|
| |