Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0349 |
Symbol | |
ID | 8724077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 443455 |
End bp | 444786 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | xylose isomerase |
Protein accession | YP_003385212 |
Protein GI | 284035282 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACAA TCACGCTGGG TAACCAGGAA TTCTTCCCCG GTATTGGTGC CATCGCTTAT GAAGGCCCTA CCTCAAAAAA TCCTCTTTCG TTCAAATGGT ACAATCCGGA TTTGGTTATT GGCGGAAAAA CCCTGCGCGA GCAGTTACGA TTTGCCATTA GCTACTGGCA TACATTCACC GGAACCGGGG GTGACCCCTT TGGTCCCGGC ACGCGTGTTT TTGCCTGGGA TCAGGATAAC GATGCCGTTG GTCGGGCTAA ATTAAAGATG GATGCCGCCT TCGAGTTCAT CACCAAAATA GGCGCACCTT ACTATTGCTT TCACGATGTC GATCTGGTCG ATGAAGCACC TACGGCAGCC GAATACGAAA AACGGCTGCA GGCCATTGTC GAGTATGGGC AGCAGAAGCA GAAAGAGAGT GGCGTAAAGC TGCTGTGGGG AACGGCCAAC GTATTCTCCA ACCCCCGCTA CATGAACGGG GCATCGACCA ATCCCGACTT TGCGGTGCTG GCCTACGCGG GCACTCAGGT GAAAAACTCA ATCGACGCAA CGATTGCCCT TGGTGGCGAA AACTACGTAT TCTGGGGCGG TCGCGAAGGG TATATGTCGC TTTTGAACAC CAACATGAAG CGCGAAGTAG AGCACCTGGC GAAGTTCTTG ACCATGGCCC GCGATTATGC CCGTAAGCAA GGCTTTAAAG GTACGTTCTT CATTGAGCCA AAGCCTATGG AGCCTACCAA GCACCAGTAC GATTACGATG CAGCTACCGT TATTGGCTTC CTACGCCAGT ATGGTCTCGA CAAAGATTTT CAGTTAAACA TTGAAGTAAA CCACGCGACG CTGGCGGGCC ATACCTTCGA TCATGAATTA CAGGTGGCCG CTGACGCGGG TATGCTGGGC AGCATCGACG CCAACCGGGG CGATTACCAG AATGGCTGGG ATACCGACCA GTTTCCGATC AATCTGTATG AGCTGGTCGA AGCGGCCCTG GTGATTCATC AGGCAGGCGG CATTAAGCCC GGCGGCATTA ACTTCGACGC CAAAGTACGG CGTAATTCAA CCGACCTCGA AGACCTATTC GTGGCACATA TCAGCGGCAT GGATGCGTTT GCCCGCTCGT TTATCGTAGC CGATAACATC CTGAAAGACT CGGACTACCT GAAATTCCGT AGCGAACGCT ATGCCTCGTT CGATGGCGGC CAGGGTAAAG CGTTTGAAGA AGGCAAATTA ACGCTCGAAG ACCTCCGCAG CTATACCCTG GAAAATGGCG AGCCACAACT TCGCAGCGGC AAGCAGGAAT GGCTCGAAAG CATTATCAAC CAGTACATCT AA
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Protein sequence | MSTITLGNQE FFPGIGAIAY EGPTSKNPLS FKWYNPDLVI GGKTLREQLR FAISYWHTFT GTGGDPFGPG TRVFAWDQDN DAVGRAKLKM DAAFEFITKI GAPYYCFHDV DLVDEAPTAA EYEKRLQAIV EYGQQKQKES GVKLLWGTAN VFSNPRYMNG ASTNPDFAVL AYAGTQVKNS IDATIALGGE NYVFWGGREG YMSLLNTNMK REVEHLAKFL TMARDYARKQ GFKGTFFIEP KPMEPTKHQY DYDAATVIGF LRQYGLDKDF QLNIEVNHAT LAGHTFDHEL QVAADAGMLG SIDANRGDYQ NGWDTDQFPI NLYELVEAAL VIHQAGGIKP GGINFDAKVR RNSTDLEDLF VAHISGMDAF ARSFIVADNI LKDSDYLKFR SERYASFDGG QGKAFEEGKL TLEDLRSYTL ENGEPQLRSG KQEWLESIIN QYI
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