| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0334 |
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| Symbol | |
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| ID | 8724062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 426471 |
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| End bp | 427427 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003385197 |
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| Protein GI | 284035267 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.212034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.78899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA GACGGAATTT TTTACGTGAT GCCGGTGCGC TAACCCTGAG CGGCCTCGTG
CTGCCAACGC TGACGAAAGC AGATAACTTC TTTTTGGCAG CCCCTAAATA CCCCATCGGT
ATCCAATTGT TTACGCTGTT CAAGGCGATG AATGAAGACC CGAAGGGAAC CCTGGAAAAA
GTAGCGGCTG CGGGGTACAA TGAAATAGAA TCGGCCTTTA ATACGCGTGG AGGCTATTAT
GGCTATTCGG CCAAAGACTT TCGAAAACTG GTTAGTGATC TGGGTATGAC CTGGCGGGCA
CACCATGCCG GGGGTGCTCC ATTTCGCCCA CGGCCTGCGA CAGCACCGCC AGCAGGAGCC
GCAGCACCGG CCGCACCCCG CCCGGCAATG GATTTCTCTA AAATGCCGCC TATGCTCAAC
CTGCGCGACA ACTACCAGCA GTTGATCGAT GAGGCCGGTG AGGGCGGATT GTCGTATCTG
GTCTGTTCCA GCACACCCGT CGGCACCATT GATGACATCA ACAAGTCGAT AGAGGTATTT
CAAAAGACGG GCGAAGCGGC TAAAAAAGCA GGTATCGGTT TCGCCTACCA CAACCACGCT
ACCGAATTTG ACCCCGTTGA AGGTGGTAAG ACGCCCTATG AGCTGATCCT GTCGCAGACG
GATAAGGAGC TGGTGAAAAT GGAACTGGAC CTTGCCTGGG CTACCAAAGC GGGTAAAGAT
CCCGTGGCTT TGTTTAAAGA ACAGCCCGGC CGGTTCCCGC TCTGGCACAT CAAGGATATT
AAAGACGACA ACAAAACGAT TACCGAAGTC GGAAACGGAG TTGTTGATTT TAAGAAGGCG
TTTTCAGCGG CTAAAACAGC GGGTCTGAAA TACTTCTTTG TGGAGCAGGA CATGGCACCG
CAGGGTATCG AAAGTATTAC GACCAGCATT ACCAATCTGA AAAAGATACT GGCTTAA
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| Protein sequence | MTTRRNFLRD AGALTLSGLV LPTLTKADNF FLAAPKYPIG IQLFTLFKAM NEDPKGTLEK
VAAAGYNEIE SAFNTRGGYY GYSAKDFRKL VSDLGMTWRA HHAGGAPFRP RPATAPPAGA
AAPAAPRPAM DFSKMPPMLN LRDNYQQLID EAGEGGLSYL VCSSTPVGTI DDINKSIEVF
QKTGEAAKKA GIGFAYHNHA TEFDPVEGGK TPYELILSQT DKELVKMELD LAWATKAGKD
PVALFKEQPG RFPLWHIKDI KDDNKTITEV GNGVVDFKKA FSAAKTAGLK YFFVEQDMAP
QGIESITTSI TNLKKILA
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