| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0332 |
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| Symbol | |
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| ID | 8724060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 423043 |
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| End bp | 425652 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003385195 |
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| Protein GI | 284035265 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.879303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.710919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT ATTTCCTCCT CCTGCTCCTC GGAACGTTAA CGACGCTGCT TGATCCCAGT
GTCATCTATG CACAGTTTGG CCCTCCGGGT GGCGGCCCGG GTGGCCCCGG TGGTTTTGGC
GGACAGGACA CGCGCCGTAA AAAAGAATTT ACGGGTGTGG CCGAAGAAAC GCCCAAAGGA
AATGGGAAGA TAGCCGGGAT ACTGGTCGAC TCGACCTCGG GTAAACCCGT TGAGTTTGCC
ACCGTTGCGC TCATCAATGT TGCCACCAAC AAGCCCATTG ACGGAACCAC ATCGGATGCT
AAAGGACAGT TTTCATTGAC TAAACTGGCA CCGGGCGACT ACCGGCTACA GTATTCGTTT
ATCGGCTACA AAACCCGCGA CTCGCAGAAG GTCACCGTTG TAAAAGGTAC AGACCTTAAC
CTGGGCTCGG TAAAACTACC GGCCGATGTG CGTACGCTGG GCGAAGTTGT GGTAACGGGC
CAGGCGGCCC TCATTGAAGA AAAAGTTGAC CGGCTGGTGT TCAACGCCGA TAAAGACATC
ACCGCCAAAG GGGGCGATGC CTCGGATGTG CTGAAGCGGG TGCCGATGCT GTCGGTCGAT
CTGGACGGAA ATGTTAGTTT GCGAGGCAGC CAGAATATTC GGGTGCTGAT CAACAATAAG
CCATCGACCA TCGTAGCCGC CAACGTGGCC GATGCCCTCA AGCAACTCCC CGCCGATATG
ATCAAATCGG TAGAGGTCAT TACGAGCCCG TCGGCCAAAT ACGACGCCGA AGGAGCCGCC
GGTATCATTA ACATCATCAC TAAAAAGAAT ACCCTGCACG GGCTGACCCT GAACGTTGAT
GCCGGGGCGG GACTTCGCGC ATCGAATTTG GGTCTGAACG GTTCGTACCG GCAGGGAAAA
CTGGGCCTGA CCCTGGGTGG TTTTGGCCGC GCCGGGTACA ATGGGGCTTC ATCTACCCTG
GATCAAACGA CGAAGGTGGG CGGACAGACG TTGCGGACGA GCCAGCAGGG TACCGCTTTC
GACAAGCCCA TATTCGGGCA GTATACGCTG GGCATGGACT ACGACCTGGC TAAAAATCAG
TCGCTTTCGG CTAACGTTCG GTTTGGTACC CGGAATTTCA TTCAGCAGCA AACCCAGTTG
ACCAATACGT ACGCCAACGA AGTACTGCGA AACATGTCGA ATCGCGATGT AGACCGGAAA
GATCTGTCCA ACTCGGTGGA TATGAACCTG GATTATATCC GGACGTTCAA GCCGCAGCAG
GAATGGTCTA TCTCCACGCA GTACAGCCGC ACGGGGTTGA CCAATAACTT CTACGCCGAT
ATCCTTGGCC AAACGGGCGA GCTAACCAGC CGCCAGCGCA ACCTCAACAA CAACACCAAT
CAGGAGTTTA CCATCCAGAC CGATTACCAG ACGCCCATCC GCAAAAATCA ATTGCTGGAA
TTTGGCGGCA AGGCCATTAT GCGGCAGGTC GACAGCCGGT TTCAGTACCA GCTTGGCGGT
AGTACGGGTG AGCTGGTCTT CGACCCGACA AATCCATCAG GCTCATTGCT CTATAACCAG
AACATCGGCG CGGGGTATAT TTCGTATACC TACGTAACGC CCAGCAAATA CACGTTTAAA
GTGGGTACGC GCTACGAACA TACGGGCATT ACGGCCAAGG CAAACGAAAA TACGAACCTG
AATATTCCCG CCTATAGCAA TCTGGTGCCC AGCATCAACG TCTCGAAAAG CCTAAAAGGC
GGAACAACCG TAAAAGCTGC TTACAACCGC CGGATTCAGC GGCCGGGTTT ACAACAGCTG
AACCCGAACG TAAACACGGC TAACCCACAG ATGATTATGG TGGGTAACCC GAACCTGAGT
CCCGAACTAA CCGACAACGT TGAACTAAGC TTAAGCTCGA CCGTCAAGAA AACGTACATC
AATGCATCGG TATTCGGGCG GTTGACCAAC AACGGTATCT CCCAAATCCG GATACCATCC
GATACGCTGG CCGGGGCGAT CATCACGACG TTTCAAAACA TTGGCGTACA GCGCACCGTT
GGTACCAACG TCTTTTTCAA CACCAGCATC ACACCTAAAT GGACGGTCAA CGGCGGTATT
GATGCGTACT ATGTGTACAT GCAGGGCCTG ACGCCGGGTG CCGACGGGAA GTCGATCACG
ATCAGCAATA CGGGGGTGAG CCTTGGCGGG CGGCTGATGA GCCAGCTCCA GCTCGACAAA
GGGTGGAGCG CGCAGGTGTT CAGCTTTTTC CGGGGACCAA GCCCGCAATT GCAGGGCACG
ATGGGCAGCT TTTATATGTA CTCGGTGGGT GTTCGGAAAG ATGTGGCCAA CAAGCGGGGT
AGCATTGGGC TGGCCGCCGA GAACTTCGCG GGTGGCGTAA CGATGCGCAC TACGCTGAAC
ACACCAACGC TGTCGTCGGT GAGTGTTACC AACCTGTACA ACTCAAACGT AAAAGTGACA
TTCTCGTACC GAATCGGCAA AATGACCTTC GAAGCACCCC GCAAAAAGGG CCGTTCGGTT
AGCAATGACG ACGTTAAAGG TGAAGGCGAC GGTGGTGGTC AGCCACAGGC AGCTCCAGCA
GCGGCTCCGG CGGGCGGTCG GCCCCGCTAA
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| Protein sequence | MKRYFLLLLL GTLTTLLDPS VIYAQFGPPG GGPGGPGGFG GQDTRRKKEF TGVAEETPKG
NGKIAGILVD STSGKPVEFA TVALINVATN KPIDGTTSDA KGQFSLTKLA PGDYRLQYSF
IGYKTRDSQK VTVVKGTDLN LGSVKLPADV RTLGEVVVTG QAALIEEKVD RLVFNADKDI
TAKGGDASDV LKRVPMLSVD LDGNVSLRGS QNIRVLINNK PSTIVAANVA DALKQLPADM
IKSVEVITSP SAKYDAEGAA GIINIITKKN TLHGLTLNVD AGAGLRASNL GLNGSYRQGK
LGLTLGGFGR AGYNGASSTL DQTTKVGGQT LRTSQQGTAF DKPIFGQYTL GMDYDLAKNQ
SLSANVRFGT RNFIQQQTQL TNTYANEVLR NMSNRDVDRK DLSNSVDMNL DYIRTFKPQQ
EWSISTQYSR TGLTNNFYAD ILGQTGELTS RQRNLNNNTN QEFTIQTDYQ TPIRKNQLLE
FGGKAIMRQV DSRFQYQLGG STGELVFDPT NPSGSLLYNQ NIGAGYISYT YVTPSKYTFK
VGTRYEHTGI TAKANENTNL NIPAYSNLVP SINVSKSLKG GTTVKAAYNR RIQRPGLQQL
NPNVNTANPQ MIMVGNPNLS PELTDNVELS LSSTVKKTYI NASVFGRLTN NGISQIRIPS
DTLAGAIITT FQNIGVQRTV GTNVFFNTSI TPKWTVNGGI DAYYVYMQGL TPGADGKSIT
ISNTGVSLGG RLMSQLQLDK GWSAQVFSFF RGPSPQLQGT MGSFYMYSVG VRKDVANKRG
SIGLAAENFA GGVTMRTTLN TPTLSSVSVT NLYNSNVKVT FSYRIGKMTF EAPRKKGRSV
SNDDVKGEGD GGGQPQAAPA AAPAGGRPR
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