Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0332 |
Symbol | |
ID | 8724060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 423043 |
End bp | 425652 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003385195 |
Protein GI | 284035265 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.879303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.710919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAT ATTTCCTCCT CCTGCTCCTC GGAACGTTAA CGACGCTGCT TGATCCCAGT GTCATCTATG CACAGTTTGG CCCTCCGGGT GGCGGCCCGG GTGGCCCCGG TGGTTTTGGC GGACAGGACA CGCGCCGTAA AAAAGAATTT ACGGGTGTGG CCGAAGAAAC GCCCAAAGGA AATGGGAAGA TAGCCGGGAT ACTGGTCGAC TCGACCTCGG GTAAACCCGT TGAGTTTGCC ACCGTTGCGC TCATCAATGT TGCCACCAAC AAGCCCATTG ACGGAACCAC ATCGGATGCT AAAGGACAGT TTTCATTGAC TAAACTGGCA CCGGGCGACT ACCGGCTACA GTATTCGTTT ATCGGCTACA AAACCCGCGA CTCGCAGAAG GTCACCGTTG TAAAAGGTAC AGACCTTAAC CTGGGCTCGG TAAAACTACC GGCCGATGTG CGTACGCTGG GCGAAGTTGT GGTAACGGGC CAGGCGGCCC TCATTGAAGA AAAAGTTGAC CGGCTGGTGT TCAACGCCGA TAAAGACATC ACCGCCAAAG GGGGCGATGC CTCGGATGTG CTGAAGCGGG TGCCGATGCT GTCGGTCGAT CTGGACGGAA ATGTTAGTTT GCGAGGCAGC CAGAATATTC GGGTGCTGAT CAACAATAAG CCATCGACCA TCGTAGCCGC CAACGTGGCC GATGCCCTCA AGCAACTCCC CGCCGATATG ATCAAATCGG TAGAGGTCAT TACGAGCCCG TCGGCCAAAT ACGACGCCGA AGGAGCCGCC GGTATCATTA ACATCATCAC TAAAAAGAAT ACCCTGCACG GGCTGACCCT GAACGTTGAT GCCGGGGCGG GACTTCGCGC ATCGAATTTG GGTCTGAACG GTTCGTACCG GCAGGGAAAA CTGGGCCTGA CCCTGGGTGG TTTTGGCCGC GCCGGGTACA ATGGGGCTTC ATCTACCCTG GATCAAACGA CGAAGGTGGG CGGACAGACG TTGCGGACGA GCCAGCAGGG TACCGCTTTC GACAAGCCCA TATTCGGGCA GTATACGCTG GGCATGGACT ACGACCTGGC TAAAAATCAG TCGCTTTCGG CTAACGTTCG GTTTGGTACC CGGAATTTCA TTCAGCAGCA AACCCAGTTG ACCAATACGT ACGCCAACGA AGTACTGCGA AACATGTCGA ATCGCGATGT AGACCGGAAA GATCTGTCCA ACTCGGTGGA TATGAACCTG GATTATATCC GGACGTTCAA GCCGCAGCAG GAATGGTCTA TCTCCACGCA GTACAGCCGC ACGGGGTTGA CCAATAACTT CTACGCCGAT ATCCTTGGCC AAACGGGCGA GCTAACCAGC CGCCAGCGCA ACCTCAACAA CAACACCAAT CAGGAGTTTA CCATCCAGAC CGATTACCAG ACGCCCATCC GCAAAAATCA ATTGCTGGAA TTTGGCGGCA AGGCCATTAT GCGGCAGGTC GACAGCCGGT TTCAGTACCA GCTTGGCGGT AGTACGGGTG AGCTGGTCTT CGACCCGACA AATCCATCAG GCTCATTGCT CTATAACCAG AACATCGGCG CGGGGTATAT TTCGTATACC TACGTAACGC CCAGCAAATA CACGTTTAAA GTGGGTACGC GCTACGAACA TACGGGCATT ACGGCCAAGG CAAACGAAAA TACGAACCTG AATATTCCCG CCTATAGCAA TCTGGTGCCC AGCATCAACG TCTCGAAAAG CCTAAAAGGC GGAACAACCG TAAAAGCTGC TTACAACCGC CGGATTCAGC GGCCGGGTTT ACAACAGCTG AACCCGAACG TAAACACGGC TAACCCACAG ATGATTATGG TGGGTAACCC GAACCTGAGT CCCGAACTAA CCGACAACGT TGAACTAAGC TTAAGCTCGA CCGTCAAGAA AACGTACATC AATGCATCGG TATTCGGGCG GTTGACCAAC AACGGTATCT CCCAAATCCG GATACCATCC GATACGCTGG CCGGGGCGAT CATCACGACG TTTCAAAACA TTGGCGTACA GCGCACCGTT GGTACCAACG TCTTTTTCAA CACCAGCATC ACACCTAAAT GGACGGTCAA CGGCGGTATT GATGCGTACT ATGTGTACAT GCAGGGCCTG ACGCCGGGTG CCGACGGGAA GTCGATCACG ATCAGCAATA CGGGGGTGAG CCTTGGCGGG CGGCTGATGA GCCAGCTCCA GCTCGACAAA GGGTGGAGCG CGCAGGTGTT CAGCTTTTTC CGGGGACCAA GCCCGCAATT GCAGGGCACG ATGGGCAGCT TTTATATGTA CTCGGTGGGT GTTCGGAAAG ATGTGGCCAA CAAGCGGGGT AGCATTGGGC TGGCCGCCGA GAACTTCGCG GGTGGCGTAA CGATGCGCAC TACGCTGAAC ACACCAACGC TGTCGTCGGT GAGTGTTACC AACCTGTACA ACTCAAACGT AAAAGTGACA TTCTCGTACC GAATCGGCAA AATGACCTTC GAAGCACCCC GCAAAAAGGG CCGTTCGGTT AGCAATGACG ACGTTAAAGG TGAAGGCGAC GGTGGTGGTC AGCCACAGGC AGCTCCAGCA GCGGCTCCGG CGGGCGGTCG GCCCCGCTAA
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Protein sequence | MKRYFLLLLL GTLTTLLDPS VIYAQFGPPG GGPGGPGGFG GQDTRRKKEF TGVAEETPKG NGKIAGILVD STSGKPVEFA TVALINVATN KPIDGTTSDA KGQFSLTKLA PGDYRLQYSF IGYKTRDSQK VTVVKGTDLN LGSVKLPADV RTLGEVVVTG QAALIEEKVD RLVFNADKDI TAKGGDASDV LKRVPMLSVD LDGNVSLRGS QNIRVLINNK PSTIVAANVA DALKQLPADM IKSVEVITSP SAKYDAEGAA GIINIITKKN TLHGLTLNVD AGAGLRASNL GLNGSYRQGK LGLTLGGFGR AGYNGASSTL DQTTKVGGQT LRTSQQGTAF DKPIFGQYTL GMDYDLAKNQ SLSANVRFGT RNFIQQQTQL TNTYANEVLR NMSNRDVDRK DLSNSVDMNL DYIRTFKPQQ EWSISTQYSR TGLTNNFYAD ILGQTGELTS RQRNLNNNTN QEFTIQTDYQ TPIRKNQLLE FGGKAIMRQV DSRFQYQLGG STGELVFDPT NPSGSLLYNQ NIGAGYISYT YVTPSKYTFK VGTRYEHTGI TAKANENTNL NIPAYSNLVP SINVSKSLKG GTTVKAAYNR RIQRPGLQQL NPNVNTANPQ MIMVGNPNLS PELTDNVELS LSSTVKKTYI NASVFGRLTN NGISQIRIPS DTLAGAIITT FQNIGVQRTV GTNVFFNTSI TPKWTVNGGI DAYYVYMQGL TPGADGKSIT ISNTGVSLGG RLMSQLQLDK GWSAQVFSFF RGPSPQLQGT MGSFYMYSVG VRKDVANKRG SIGLAAENFA GGVTMRTTLN TPTLSSVSVT NLYNSNVKVT FSYRIGKMTF EAPRKKGRSV SNDDVKGEGD GGGQPQAAPA AAPAGGRPR
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