| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0330 |
|---|
| Symbol | |
|---|
| ID | 8724058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 420960 |
|---|
| End bp | 421724 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LytTR family |
|---|
| Protein accession | YP_003385193 |
|---|
| Protein GI | 284035263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.489053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTTT CCTGCATTGC CGTCGATGAT GAGCCGCTGG CATTAGGCCT TGTTTGTGCC
TTCATTGAAA AAACGCCTTT TCTCCAGTTA GCCGGTCGCT ACAGCAGCGC TGTCGAAGCC
TTAGAGGGGT TACTATCCGG CCCTCCCGTG AATGTAGTTT TCCTGGACAT CCAAATGCCG
GACCTGACCG GTCTGGAACT GGCCCGCGTT CTGGAGCGGA GTAACCGGGG GGCGCACACG
ACACGAATTG TCTTTACCAC CGCTTTCGAT CAGTTTGCGC TCGATGGCTT TCGAGTCGAT
GCGCTGGACT ACTTGCTGAA GCCGTTCAAC TACGAAGAAT TTTTACGGGC AGCGAGTAAA
GCCCGGCAGT ATTTTGATCT GGTTCAGCGG ACGGAACCAG TCCCGGCGGC TCAGGTTCTG
GCCGCTCCCA ACGAAATAGC CGACGATCAC CTCTTTCTAA AAGTCGAATA CCAATTGGTT
CGCATTGCTT ACAACGACAT TTTATACATT GAAGGACTGA AGGATTACGT GAAAGTATAT
CGGCAAAGTG AGCCGGATAA GCCTTTGCTA TCGCTGACTA GTTTGAAGGG GCTGGAAGAA
AAATTGCCAG CCAATCAGTT CATGCGGGTT CACCGGTCGT TTATTATCTC GCTACAACGG
ATCAGCGCGT TTACCCGGAA CTCCGTCCAG ATCGGTTCGG TGGTCATACC CGTCAGCGAT
CAGTACAAAG ATGTTTTTGG CCAGTTCATT GCCCGCTGGC TATAA
|
|---|
| Protein sequence | MTLSCIAVDD EPLALGLVCA FIEKTPFLQL AGRYSSAVEA LEGLLSGPPV NVVFLDIQMP
DLTGLELARV LERSNRGAHT TRIVFTTAFD QFALDGFRVD ALDYLLKPFN YEEFLRAASK
ARQYFDLVQR TEPVPAAQVL AAPNEIADDH LFLKVEYQLV RIAYNDILYI EGLKDYVKVY
RQSEPDKPLL SLTSLKGLEE KLPANQFMRV HRSFIISLQR ISAFTRNSVQ IGSVVIPVSD
QYKDVFGQFI ARWL
|
|---|
| |