| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0325 |
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| Symbol | |
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| ID | 8724053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 413491 |
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| End bp | 415284 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | cell surface receptor IPT/TIG domain protein |
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| Protein accession | YP_003385188 |
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| Protein GI | 284035258 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA CATTACGAGT TTTCTTTTCG TTTAGTATCC TTCTTGGGGT TTTCAGTTGC
CGCGTTCAGC ATAGCCCGCC AGAACTAGTT AAAATTTCTG TTAGCCAGGC TTACGTCGAC
CAGCCCATTA CGCTATCGGG CTATCAGTTC GGTACTGACC CTATAGTTAC GTTTGGCTCA
GCGACATCGG CGGTTAATGC ACCTATTGGC AGCCACGATG AAACCACCAT TCAGCTTCAG
GTTCCCAGGG TTGCTCCAGG GAAAACCCAA ATTCGTGTTC AAACGAAGGA GGGCAGTTCC
GATCCGCTGC CCTTTACGGT TATTCAGCCA GCCCCTATCG TGACGGCGAT TACGCCCGCA
AACGGCCTTC CGGGTACTCA GGTAGTCGTT ACGGGCGATT ACCTGAACGA AATTCGACGG
GTTCGATTCA ATGAAATCGA CGCCATCATT AACGACAGCA CCGCAAAAAA ATTAACGATT
ACTATCCCGA AAACTGTACC CAGAGGACCG CAGGCATTTA TCGTCGAGAC ATCGGCGGGT
GTTGTTATCA ATCGATTTGT TATTGCCGGA ACGCCCCAGA TCACCAGCAT AAGCCCCACC
AAAGCCAAAC CTGGTGCGGA GTTAGTCATT CTTGGTAAGA ATTTCACGGA TGGCACGGTC
AGTATTAACG GGCTGGTTCC CGATAAGGCG CTAACGACGG TTAAAGACAC CGAAATTCGC
ACCATTATTC CGCAGTCGGC GACTTCGGGG CGGGTACAGG TGCAGGTTTT TGAATCATTG
ATAGCTACCA GTACCGATAC GCTGAAGTTG TTCCAGCCAC CTTTTATTAC GCACCTTCTT
ACCCAGGACG GCGCAGCGGG CGAAAAACTG GTTATAGAAG GTCGTGACTT CCGTGAGATT
TCGACCGTGT CGATTGGTAA TGTATCGGTA CCTTTCCGGG TCATTAGTGA AACGCAGCTG
GAAGCTACCG TTCCTGCTTT ACCCGCATCG GGCCGGGTAT CGGTATCCGC TACCGGAATT
GGTGGTACGA CGACGGCAAC AGACCCGTTC TTCTTTTTCC TGCCGCCCTC CAACCTTACC
TTCAGTCCAG CCCGGCAACT GCCCGGACGC CCGCTAACGG TATCCGGTAA CAACCTATAC
CGGATCACCA GTGTCAGCGT CAGCGGTATT CCGGTGCCCA TCACCAGCCG CAACGAAGGT
ATCGACCTGC TCATCGGTAT TCCCGAAGTC GCCGTAAGTG GGCCAATTAC GGTAAGCAGC
CGGGCAGGTA GCGCATCGGC TCCGTTAGTA ATCGTTCAGA AAGCGGTGGT TTCGGATATC
CTCCCGTTAA AAGCCCGCCC CGGCGAGCGA GTAGTCATCC GGGGTGATTT TCTGTTAAAT
GCATCTATCC TATTCACAGG CTCCACAACA CCTGCCGCCG ACGGAGGCAA AAAGGAGGAT
AAAGAACGAT GGGTGCTGGT TCCCACCAAC GCCCAGACTG GGCCATTGCG GGTAACGAAC
GAAACGAATG ATGTAATTAC AACGGCACCG TTCACAGTTC TTCGGCTTAT CAGCAACATA
GATTTCACCC CCCAATCGGG TAAGGTTGGC GATCAGATTG TCCTGACCGG GCAGAATATG
GCCACCGTTC AGGAAGTTCG ATTCAGCAAC GGAACGTCCA CACCGGCCGC TTTTGTCCTG
GAGGGCGCGA ACCTTCGGGT CACGATTCCG GCGGGGGCAA CAACGGGGCA GATCTGCCTA
ACCAACGAAG CCGGAACGAG TTGCAGCAGT TCGAATTTTA CGATAACCCG GTAG
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| Protein sequence | MKSTLRVFFS FSILLGVFSC RVQHSPPELV KISVSQAYVD QPITLSGYQF GTDPIVTFGS
ATSAVNAPIG SHDETTIQLQ VPRVAPGKTQ IRVQTKEGSS DPLPFTVIQP APIVTAITPA
NGLPGTQVVV TGDYLNEIRR VRFNEIDAII NDSTAKKLTI TIPKTVPRGP QAFIVETSAG
VVINRFVIAG TPQITSISPT KAKPGAELVI LGKNFTDGTV SINGLVPDKA LTTVKDTEIR
TIIPQSATSG RVQVQVFESL IATSTDTLKL FQPPFITHLL TQDGAAGEKL VIEGRDFREI
STVSIGNVSV PFRVISETQL EATVPALPAS GRVSVSATGI GGTTTATDPF FFFLPPSNLT
FSPARQLPGR PLTVSGNNLY RITSVSVSGI PVPITSRNEG IDLLIGIPEV AVSGPITVSS
RAGSASAPLV IVQKAVVSDI LPLKARPGER VVIRGDFLLN ASILFTGSTT PAADGGKKED
KERWVLVPTN AQTGPLRVTN ETNDVITTAP FTVLRLISNI DFTPQSGKVG DQIVLTGQNM
ATVQEVRFSN GTSTPAAFVL EGANLRVTIP AGATTGQICL TNEAGTSCSS SNFTITR
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