Gene Slin_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0324 
Symbol 
ID8724052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp412514 
End bp413449 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content53% 
IMG OID 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 
Protein accessionYP_003385187 
Protein GI284035257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA ACCAACTCTC TATTCTCATT GCCGACGAAA TGCACCCGTC GCTTTTTGCC 
ATGCTCGATC AGGCGGGCTA TCAGTATGAT TATCAGCCAA AAATTACGCG TGCTGACTTA
TTAACCGCGC TTTCGCCTTT CGATGGGCTA ATCATCCGGA GTAAAACTTT CGTGGATGAG
CAGTTACTAA ATCAGGCCCC TAAGCTTCGT TTTATTGCCC GGGCCGGTGC TGGTCTGGAT
CTCATTGATC TGGCTGCCAC AGAACAGCGG CATATTCGCG TTTTTCACGC GGGCGAAGGA
AACCGCGATG CCGTTGGTGA GCATGCTGTT GGTATGTTGC TGGCCCTGCT GGCCAATATT
CTGAAGGCAG ACCGCGAGGT GCGTCAGGGC ATATGGGATC GGGAAGGGAA CCGGGGCTAC
GAACTCGGTA GTCTGACCGT TGGGCTTATT GGCTACGGTA ACAATGGACA GGCTACTGCC
CGTAGGCTCA GTGGATTTGG TTGCCGGGTG CTGGCTTACG ACAAATTTCT GACCAATTAC
GGCAACGCCT ATGCCGAAGA AGCTTCTCTG GAGCAGATCA AAGCTGAAGC GGACGTGCTC
AGCCTGCACA TTCCCCTAAC CGACGAAACA CGTACATTGA TCAACGACGA GTTTATTGCG
CAATTCAGCA AGCCATTTTA TCTGATAAAT GTTGCGCGGG GCGAAATCGC TTCGCTGGCT
GCCATTGTTC GCGGGCTGGA AAGCGGAAAG ATTCGTGGAG CCTGCCTGGA TGTGCTGGAG
AACGAGAAAC TGGCCAAACT CACGCCCGAC CAGCAGCAGT CATTTGATTA CCTTCGCCAG
TCGGATCGGG TTGTACTGAC TCCGCACGTT GCCGGCTGGA CACACGAAAG CTATGTCAGG
ATCAACGAAG TGCTGGTAAG GCAAATGCAG GCATAA
 
Protein sequence
MSQNQLSILI ADEMHPSLFA MLDQAGYQYD YQPKITRADL LTALSPFDGL IIRSKTFVDE 
QLLNQAPKLR FIARAGAGLD LIDLAATEQR HIRVFHAGEG NRDAVGEHAV GMLLALLANI
LKADREVRQG IWDREGNRGY ELGSLTVGLI GYGNNGQATA RRLSGFGCRV LAYDKFLTNY
GNAYAEEASL EQIKAEADVL SLHIPLTDET RTLINDEFIA QFSKPFYLIN VARGEIASLA
AIVRGLESGK IRGACLDVLE NEKLAKLTPD QQQSFDYLRQ SDRVVLTPHV AGWTHESYVR
INEVLVRQMQ A