Gene Slin_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0310 
Symbol 
ID8724038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp400734 
End bp401519 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content54% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003385173 
Protein GI284035243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAA ACCTGCACGA TAAAGTCATC ATCGTTACTG GTGGCGCCAA AGGTATTGGC 
GAAGGAATTT CAAAAGTACT GGCCGCAGAA GGTGCCATTC CCGTAATTAT TGGGCGTAAT
GAAGCGGACA ATCAACATAC GGTAGATGCC ATTCGGGCTA CGGGCGGGCA GGCGCACCAG
ATCGTGGCAG AACTGACCGA GCCCGCAGCC TGTCAGAATG CCGTGGAGCA GACACTGGTT
CAGTTTGGCC GGATAGACGG GCTGGTGAAT AACGCGGGCG TCAATGACGG CGTTGGTCTT
GAGCATGGTT CGTACGAAGG ATTCATTGCA TCCCTGCACA AAAATCTGGT GCATTATTAC
CTGATGGCTC ACCATGCGCT GCCAGCGCTG AAAGAATCGA AGGGAGCTAT TGTCAATATT
GGCTCGAAGG TGGCCGAAAC GGGTCAGGGG AACACGTCGG CCTATGCGGC ATCCAACGGT
GGCCGCAACG CGCTCACCCG CGAATGGGCG GTGGAACTGC TGCCCTATGG CATTCGGGTC
AACTGCGTGG TGGTTGCCGA AAGCTGGACA CCACTCTACG CCAACTGGAT TAAAACGCTA
CCCAACCCGG AAGAGAAACT AAAACAGATT GTTTCTAAAA TTCCGCTGGA ACACCGCATG
ACCACACCGG AAGAATTGGG CAACGCGGTA GCCTTCCTGC TGTCTGATAG ATCGAGCCAT
ACAACAGGGC AGCTTGTGCA CGTCGACGGC GGCTATACTC ACCTCGACCG GGCCATTACC
GATTAA
 
Protein sequence
MDLNLHDKVI IVTGGAKGIG EGISKVLAAE GAIPVIIGRN EADNQHTVDA IRATGGQAHQ 
IVAELTEPAA CQNAVEQTLV QFGRIDGLVN NAGVNDGVGL EHGSYEGFIA SLHKNLVHYY
LMAHHALPAL KESKGAIVNI GSKVAETGQG NTSAYAASNG GRNALTREWA VELLPYGIRV
NCVVVAESWT PLYANWIKTL PNPEEKLKQI VSKIPLEHRM TTPEELGNAV AFLLSDRSSH
TTGQLVHVDG GYTHLDRAIT D