Gene Slin_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0302 
Symbol 
ID8724030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp392854 
End bp393321 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content48% 
IMG OID 
ProductPeptidoglycan-binding lysin domain protein 
Protein accessionYP_003385165 
Protein GI284035235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTTT TATCATTTTT TAAGGGTGTA GGCGAAAAAA TCTTTCATAA GGATCAGGTA 
GCACCGGCTC CAGCGCAGGC AGAAGCTGTT GAGCCAGTAC GTGCTCAGGC ACTGCTCGAC
CACGTTAAGC AGTTGGGACT GGCTTACAAC ACTCTGACAG TTAAGACGAA AGGTGATACA
GTTACGATAA CTGGCTCGGT AAAATCGCAG GAAGACGCCG AAAAAATCGC GCTGGCCGTT
GGTAACGTAG AAGGCGTATC AGCCGTTGAT AACCAGCTTT CTGTCGATCA GCCTACACCA
GAAGGTAAGT TTTACACGGT AAAATCCGGC GATTCGCTGT CTAAAATAGC GAAAGAAGTC
TATGGCGATC CTATGAAATA CGGCGTCATC TTTGAAGCAA ACAAGCCCAT GCTGAAAGAC
CCCGATCTGA TCTATCCCGA TCAGGTATTG CGGATTCCAC AGCTGTAA
 
Protein sequence
MGLLSFFKGV GEKIFHKDQV APAPAQAEAV EPVRAQALLD HVKQLGLAYN TLTVKTKGDT 
VTITGSVKSQ EDAEKIALAV GNVEGVSAVD NQLSVDQPTP EGKFYTVKSG DSLSKIAKEV
YGDPMKYGVI FEANKPMLKD PDLIYPDQVL RIPQL