Gene Slin_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0290 
Symbol 
ID8724018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp381278 
End bp382408 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content52% 
IMG OID 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003385153 
Protein GI284035223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCGT TTCTGGACGT AAAACGTATT AACGCACCTT ATCAACAGAT AATCAACTCA 
GCCGTTGGGC GGGTCACTGA ATCGGGCTGG TATGTGCTGG GACAGGAAGT CGAAGCGTTT
GAAAATGAGT TTGCAGCCTA TTGCCAGACC AGGCATTGTG TAGGCGTTGC CAATGGCCTG
GAAGCTTTGA CATTAGTGTT GAACGCATGG GGTTTTCCGG CTAAAAGCGA GGTCATCGTT
GCATCAAACG CCTACATTGC TTCGGTACTC AGCATTACGC ATGCTGGATT GACTCCCGTT
TTTGTTGAGC CCGATCCACG CACCTACTTA CTCGATCCTC TCCGTATTGA AGCGGCCATT
ACGGCCAATA CCCGGGCAAT TCTGCCCGTG CATCTGTATG GCCGCTGCTG CGATATGGAT
GCAATCAATA AGGTGGCGCA CCGGTATGAC CTGAAAGTAC TCGAAGATGC CGCTCAGGCA
CATGGTGCTA GCTGCCGGGG TACCAGAATG GAACGAAAAG CGGGTAATCT GGGCGATGCC
GCAGGCTGGA GCTTCTACCC AACTAAAAAC CTGGGGGCAC TGGGTGATGC CGGAGCTATT
ACAACAAATG ATGGTGCGCT TGCCGAGCGT TTGCGTGCTT TGCGAAACTA TGGGTCCGGG
CAAAAGTACA TAAACGACTA TCTGGGATTC AACAGTCGTT TGGATGAACT TCAGGCAGCC
GTGCTATCGG CTAAACTGCC GGGGCTGACT GAAGCGAATA ACCGTCGGAA AGAACTGGTA
AAACGATACC TAACCGGTAT TACCAACCCG GACGTTGTAC TGCCACCGGC CGATCAGGTT
GAACTCGATG CCTGGCACTT GTTTGTTATT CAGCACCCCC AACGCGACGA TTTCCGGGCG
TATCTTCTGG AACAGGGTAT TGGGACGGAT ATACATTATC CTATCCCGCC CCACCATCAG
CAGGCTTATG CGGCATACGC TCATTTATCC CTGCCAATTG CCGAGCAGTT GCACCGAAAC
AGCCTGAGTT TGCCCCTCAA CCCGGCGTTG ACGGATCATG AGGCAGACTT TATCATTGGG
ACCATTAATT CAATAAGCAA CAGAACGTTT GAACTGCTAC TACCGACCTG A
 
Protein sequence
MIPFLDVKRI NAPYQQIINS AVGRVTESGW YVLGQEVEAF ENEFAAYCQT RHCVGVANGL 
EALTLVLNAW GFPAKSEVIV ASNAYIASVL SITHAGLTPV FVEPDPRTYL LDPLRIEAAI
TANTRAILPV HLYGRCCDMD AINKVAHRYD LKVLEDAAQA HGASCRGTRM ERKAGNLGDA
AGWSFYPTKN LGALGDAGAI TTNDGALAER LRALRNYGSG QKYINDYLGF NSRLDELQAA
VLSAKLPGLT EANNRRKELV KRYLTGITNP DVVLPPADQV ELDAWHLFVI QHPQRDDFRA
YLLEQGIGTD IHYPIPPHHQ QAYAAYAHLS LPIAEQLHRN SLSLPLNPAL TDHEADFIIG
TINSISNRTF ELLLPT