Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0287 |
Symbol | |
ID | 8724015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 377501 |
End bp | 379945 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | phenylalanyl-tRNA synthetase, beta subunit |
Protein accession | YP_003385150 |
Protein GI | 284035220 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.307167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTTT CCTATAAATG GTTACAAGAG TTCATTGAAT TACCCGAGTC GCCCGAAGAA GTCGGTAAAA TTTTAACCGC AACGGGACTT GAAGTCGAAG GAATAGAAAA GATAGATGCT GTACCCGGTG GACTGGCGGG TGTAGTTATT GGCCAGGTAC TAACCTGCAC TAAACATCCC GATGCCGATA AACTGAGCCT GACTACGGTT GATGTTGGAG CCGAACAGCC CTTACCCATT GTGTGTGGTG CACCTAATGT GGCGGCTGGC CAGAAAGTGA TTGTCGCACT GGTAGGGGCC ACACTTTACC CAAGCGCCGG TGAACCTTTT CAGATCAAGA AAGCCAAAAT TCGGGGCGCA GCTTCCGAAG GGATGATCTG TGCCGAAGAC GAAATTGGTC TGGGCACATC CCACGCAGGC ATTATAGTGC TGGACCCGGA CGGTCCGGCA TCCCAGCTGC CGAACGGGAC GCCCGCAGCC CGTTATTTCA ACCTCGAATC AGATTATCAA ATTGCCATTG GGTTAACGCC TAACCGCATC GATGCCGCGT CTCATTACGG CACAGCGCGC GATCTGAAAG CTGTGCTCAA ACGGCCCCTT CGCCTACCCT CCGTAGACGC CTTCGCCGTA GCTGGCACAG ACCTGACGCT CGATGTACGC GTGGAAGATG CGACAGCCTG CCCGCGGTAC GCCGGGGTTA CGTTAAATGG CCTGACCGTT GGCGAATCGC CCGACTGGCT GAAGCAACGG TTGCTGAGTA TTGGGCTTAA TCCCATCAAT AACGTCGTCG ACGTAACCAA TTACGTTTGT CATGACCTTG GCCAGCCGCT TCATGCGTTC GATGCCGCCA GGATTGCAGG CGGTAAGGTC ATCGTGAAAA CATTACCGGA GGGTACGCCT TTTATAACCC TTGATGGCGT AGAACGGAAA CTAACGGCTA CCGATCTTAT GATCTGCGAT GCCGAAAAGC CGATGTGTAT TGCCGGTGTT TTTGGCGGTC AGTATTCGGG TGTATCGGCT CAAACGACCA GCATCTTCCT GGAATCTGCT TATTTCTCCC CAACGTCTGT TCGTAAAACA GCCCAGCACC ACGGACTGAA AACGGATGCG TCGTTCCGGT TCGAGCGGGG CATTGACCCC AACATAACGG TATTTGCCCT GAAACGGGCT GCCCTGCTCA TTCAGCAAGT GGCCGGTGGA ACGGTTAGTT CAGCTATTAC CGATATTTAC CCGACTCCGA TCGAGTCATT CCGGGTGCCG GTGCGTTACC GCAATATCGA TCGACTAATC GGCATCAAAA TCGACCATTC TGAGATTCAT CGGATATTGG AAGCACTGGA CATTCAGGCC GAAGAGAAGA CCGACGACGG ATTCCTCGCC ATTGTGCCTC CTTACCGCGT CGACGTAACA CGGGAGGCCG ATGTTATTGA AGAAATACTC CGAATATACG GGCTTGATAA CGTTCCCCTG TCGGTAAACC TGGCGGCTGA TTCGTTATCG GAATTCCCGA AAACAGACCC TGATCAATGG CAAAGCCGGG TTGGCCAGCT ACTGGCGGCC AATGGCTTTT ACGAAATCCT GACCCTATCA CTAACCCGTC CGGCCTATAA TGATGCCATC CGGTCGTCAT TGCCGGGCGA GGACGTAACG CTGCTCAATC CCCTCAGCGA GGAGCTGTCT GTTATGCGGC AAACGCTGCT GTTCTCGGCG CTCGAAACGA TGTTGTATAA CCTGAACCGG CGGCAGAAAG ACTTGAAGAC ATTCGAATTG GGCAAGGTTT ATCATAAAGT AAAACTTGAC GATTCGACTA CGAAATACGT TGAACGGGTA CGGATGAGCC TGGCTATTCT CGGCAACCAG CAACCCGAAA ACTGGCTTCA GAAAGCTCAA CCGGTGGCGT TTCATGACCT GGCCACGGCC GTTCAGCGGA TACTGAACCT ATTCCGGGTC AAAGCCTACG AAACCCAACC CGCCGACACT ACCCTTTTCC AGTATGGCGT GACGTATGTT GTCAATAAAA AACCACTGGT CAGTCTGGGA TTGGTAAACC CCAAACTGAC GAAGCTGGTA GACCTAAAAC AGCCCGTGTT TTACGCCGAC TTCGACTGGC AGGCGCTGCT CAAACTAGCA ACGACCAAAG TACGCTATGA GGAAGTTTCC AAATTTCCCG AAGTTCGTCG TGACCTGTCG CTGGTACTTG ATCAGGCCAT TTCGTTCGAA CAGATCAGTA AGCTGGCCCG GCAAACGGAA CGGAAATTAT TACGGTCTGT GAATGTGTTT GATGTGTATG AAGGAGAAAA TCTGGGTGCT GGCAAAAAAG CCTATTCAGT CAGTTTTATG CTTCAGGATA CCGCCCAGAC CCTCACGGAT GCAACAATTG ATAAAACAAT GCAACGGCTC ATGACGACTT TTGAGCAGGA GTTAGGGGCA GTAATTAGAA AATAA
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Protein sequence | MEVSYKWLQE FIELPESPEE VGKILTATGL EVEGIEKIDA VPGGLAGVVI GQVLTCTKHP DADKLSLTTV DVGAEQPLPI VCGAPNVAAG QKVIVALVGA TLYPSAGEPF QIKKAKIRGA ASEGMICAED EIGLGTSHAG IIVLDPDGPA SQLPNGTPAA RYFNLESDYQ IAIGLTPNRI DAASHYGTAR DLKAVLKRPL RLPSVDAFAV AGTDLTLDVR VEDATACPRY AGVTLNGLTV GESPDWLKQR LLSIGLNPIN NVVDVTNYVC HDLGQPLHAF DAARIAGGKV IVKTLPEGTP FITLDGVERK LTATDLMICD AEKPMCIAGV FGGQYSGVSA QTTSIFLESA YFSPTSVRKT AQHHGLKTDA SFRFERGIDP NITVFALKRA ALLIQQVAGG TVSSAITDIY PTPIESFRVP VRYRNIDRLI GIKIDHSEIH RILEALDIQA EEKTDDGFLA IVPPYRVDVT READVIEEIL RIYGLDNVPL SVNLAADSLS EFPKTDPDQW QSRVGQLLAA NGFYEILTLS LTRPAYNDAI RSSLPGEDVT LLNPLSEELS VMRQTLLFSA LETMLYNLNR RQKDLKTFEL GKVYHKVKLD DSTTKYVERV RMSLAILGNQ QPENWLQKAQ PVAFHDLATA VQRILNLFRV KAYETQPADT TLFQYGVTYV VNKKPLVSLG LVNPKLTKLV DLKQPVFYAD FDWQALLKLA TTKVRYEEVS KFPEVRRDLS LVLDQAISFE QISKLARQTE RKLLRSVNVF DVYEGENLGA GKKAYSVSFM LQDTAQTLTD ATIDKTMQRL MTTFEQELGA VIRK
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