| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0274 |
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| Symbol | |
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| ID | 8724002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 358017 |
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| End bp | 361268 |
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| Gene Length | 3252 bp |
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| Protein Length | 1083 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003385137 |
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| Protein GI | 284035207 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.302704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT TGCTCTACAG GTTTCTGCAG ACCGCTTTTC TGGGCGCAGT ACTAATGCTC
TGGGGCTTAA CGGCCTCTGC CCAAGACCGG CGTGTGACGG GTAAAATTAC GGGTACCGAT
GGTCCAATAC CAGGGGCCAA CGTGGTTCTC AAAGGAACAC AAACGGGTAC TGCGACCGAT
GCCAACGGCG ATTTTTCGCT TAATATCCGG GGGGCCAACC CGGTACTGGT GGTATCAGCT
ATTGGCTTCA AAACGCAGGA AATTACGGTA GGAAACCGTA CTGCTGTTAA CTTCAAACTC
GAAGACGATG CTACTGCGCT GAACGAGGTT ATCGTAACGG GTTATACGAC CGACAGTAAG
CGCGATAATA CCGGTGCTGT TTCGACGGTA AAAGCTCGTG CGCTGACGGC TGTACCTTCG
GGCAACGTTG AGCAACAGCT ACAGGGCCGC GTTTCGGGGT TAACGGTTAT CACAAATGGA
CAACCCGGAA CCGCCAGTCA GGTGCGTATT CGTGGATTTG GTGCTTTTGG TGGTAACGAA
CCTTTGTATG TAGTTGATGG CGTGCCCGTT GGCTCAACCA ACTTTTTGGC TCCTGACGAC
ATCGAGACCA CAACGGTACT GAAGGATGCG GCTTCGGCTT CTATTTATGG AGCGCGTGCC
GCCAACGGTG TAATTGTTTA TACCACAAAG AAAGGATCGA AAACGGCTAA ACGGCTAAGC
ATTACCTATG ATGGCCAATA TGGTGTAACA GATCCGGGTA AAGGTCCTAA TAACCTGAAC
CCGAAGGAGT TTGCCGACTG GACGTGGCAA CAGTACCGGA ACACCGCGTT CCAAAACGGC
ACTGCGCCTA TTTATAATCA CCCCCAGTTT GGCTCAGGCA GTACCCCGGT CATTCCCGAT
TATATCAATG TTGGTGGCCG GGCAGGTGTT GTAGGTACAG TTGATCTGGC GGCAGAAAGA
CTTAAATACA ATGTTGACCC TACAGCAGGC GCTATTTATC AGGTAGTACG TGCCAATAAA
GAAGGCACCG ACTGGTTCAA AGCCATTACC CGTCAGGCGG CTCTTCAACG CCATTCGCTG
GGCTTTTCGG GCGGAAGCGA AAACAGTCGT TTTTACATTG GTATGAGCGC GCAAACTCAA
CAGGGTATTC TGCTTGAAAA TGACTTTAAG CGGTACACCT TCCGGGCCAA CAGCGAGTTC
AACCTCTCCA AGCGTGTTCG CATCGGTGAA AATCTTCAGT TTACCTACCT CTCTATTCGT
GGTCAGGGTG GTGCTGCAGG TGGTCAGGGT GTTGCTGCGG ATGAAAATGA CTTCAACTTA
GCTTACCGTA TGCCTTCCAT CATTCCGATC TATGACGAAT TTGGTGGCTA TGCCGGTACA
GCGGCAAAGG GCTTCAACAA CCCTCGGAAC CCGGTCGCCA GCCGTTTGGG ACAGGCTAAC
AACAATAACT TCAACATCAA TGGTTTTGGT AATGTCTATG CCGAATACGA GCCGATTGAT
GGGTTGACGC TGCGCACCAG CATCGGTGGT CAGATCAACA ACAACTATGG TGTGAGCTAT
GGCCGGATTC AGTACGAGAA CTCAGAAAAT AACTCAGCTA CGAGCTACAA CGAAAATGCC
AGTTACAATT TCTCGTACGT ATTTACCAAT ACAGCTAATT ACAAGCGTCA GTTTGGTTTG
CATAAACTCG ATGTATTAGT TGGTCAGGAA GCCCTCAATA CGGGCGTAAG TCGTAACATG
TCAGGTAACG GACAAAATCC ATTCTCGTTC GACCCTAACT TTATCACGCT GAACACGGTA
TCTTCAACGG GACGGACAGT GGGTAGTAAC TATGGTCTGG GCGTTAACTT CTACTCGCTC
TTTGGCCGGG CAAACTACTC GTTCAATGAC AAGTATATCG TAACGGGTCT TGTTCGGCGA
GACGGTTCGA GCCGCTTTGG TGCGCAAAAC CGCTATGGTG TGTTCCCGGC TGGTTCGGTA
GCCTGGCGTA TCTCGGGTGA AGAGTTCATG AAAAACCTGC CTTGGGTTAG CGACCTGAAA
ATCCGGGGTG GTTACGGTAT CATGGGTAAC TCAAACAACG TGGACCCAAA CAACCAGTTT
AACCTGTATA CAGCCAACCT GGGTAACTCA GCCTACGACA TCAACGGCAG CAACTCCAGT
ACTGTAGACG GTTACTACCG GTCACGTATC GGTAACCCAT CCGCTAAATG GGAAAGCTCC
ATTACGACCA ACATTGGTTT AGATGGTACG TTCTTCAACG GCAAGCTGGA TGTCATTTTA
GACCTTTGGC AAAAAGACAC GAAAGACTTG CTCTTTCCTG TGCCAATTCC TGACGTAATT
GGTAACTACG CGGCTGCCCC ATCCGTAAAC ATTGGGCAAA TGCGCAACAA AGGCATTGAC
CTTCAAATTA TTAACAGAGG AAAAATTGGC GGTGAAGTAG GCTATGAAGC TAACGTAACG
GCCAGTGTTT TAAGCAATAA GATTGTTTAT CTGGCTCCCG GCCTGACTTA TCTGACTAGC
GTAAACCCAG GTTTCCGTGG TATCAACCCG ATTCGAAATC AGTTGGGTTA CTCTATCTCG
TCCTTCTACG GGTACCAGAC AATGGGTCTC TTCCAGAGTA AAGAGGAAGT TGCCGCTGCT
CCCAAACAGG ACGGAGCAGC TCCGGGTCGT TTCCGTTTTG CCGATATCAA TGGCGATGGC
AAAATTGATG CCGACGACCG GACGTTCCTG GGTAGCCCGG TGCCAAAATT CACGGGTGGC
TTAAACCTGC GATTTACATA CAAAGGCTTC GATGTTGAAA CCTATGCATA CACCTCGATC
GGCAACAAAA TCTTCAATGT CTCGAAGTGG TTCACAGATT TCTACCCCTC GTTTGCCGGT
GCGGCTATCA GTGCCCGCGT GAAAGATTCG TGGTTACCAA CCAACCCCAA TCCAAACGCA
ACTGTACCCA TTTTCGAATC GGCAGCTAAT TTCAGCACCA ATGGACAGTC GAATTCCTAC
TACGTAGAAG ATGGTTCGTA CTTCCGACTA CAAAACTTCT CGATCGGGTA CAACTTCCCG
GCTTCGATCC TGAATCGCCT GAAACTACAG CGTCTTCGGG TATTTGCTTC AACCAATAAC
TTGTTCACGA TCACTAAATA CTCGGGCATA GATCCAGGTG TAGGTGGTAA CGCCGATACA
AACTTCGGTA TCGATGTAGG TAACTATCCC TTAACACGGC AGTTCACAGG CGGTTTGAGC
ATTGGCTTCT AA
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| Protein sequence | MKALLYRFLQ TAFLGAVLML WGLTASAQDR RVTGKITGTD GPIPGANVVL KGTQTGTATD
ANGDFSLNIR GANPVLVVSA IGFKTQEITV GNRTAVNFKL EDDATALNEV IVTGYTTDSK
RDNTGAVSTV KARALTAVPS GNVEQQLQGR VSGLTVITNG QPGTASQVRI RGFGAFGGNE
PLYVVDGVPV GSTNFLAPDD IETTTVLKDA ASASIYGARA ANGVIVYTTK KGSKTAKRLS
ITYDGQYGVT DPGKGPNNLN PKEFADWTWQ QYRNTAFQNG TAPIYNHPQF GSGSTPVIPD
YINVGGRAGV VGTVDLAAER LKYNVDPTAG AIYQVVRANK EGTDWFKAIT RQAALQRHSL
GFSGGSENSR FYIGMSAQTQ QGILLENDFK RYTFRANSEF NLSKRVRIGE NLQFTYLSIR
GQGGAAGGQG VAADENDFNL AYRMPSIIPI YDEFGGYAGT AAKGFNNPRN PVASRLGQAN
NNNFNINGFG NVYAEYEPID GLTLRTSIGG QINNNYGVSY GRIQYENSEN NSATSYNENA
SYNFSYVFTN TANYKRQFGL HKLDVLVGQE ALNTGVSRNM SGNGQNPFSF DPNFITLNTV
SSTGRTVGSN YGLGVNFYSL FGRANYSFND KYIVTGLVRR DGSSRFGAQN RYGVFPAGSV
AWRISGEEFM KNLPWVSDLK IRGGYGIMGN SNNVDPNNQF NLYTANLGNS AYDINGSNSS
TVDGYYRSRI GNPSAKWESS ITTNIGLDGT FFNGKLDVIL DLWQKDTKDL LFPVPIPDVI
GNYAAAPSVN IGQMRNKGID LQIINRGKIG GEVGYEANVT ASVLSNKIVY LAPGLTYLTS
VNPGFRGINP IRNQLGYSIS SFYGYQTMGL FQSKEEVAAA PKQDGAAPGR FRFADINGDG
KIDADDRTFL GSPVPKFTGG LNLRFTYKGF DVETYAYTSI GNKIFNVSKW FTDFYPSFAG
AAISARVKDS WLPTNPNPNA TVPIFESAAN FSTNGQSNSY YVEDGSYFRL QNFSIGYNFP
ASILNRLKLQ RLRVFASTNN LFTITKYSGI DPGVGGNADT NFGIDVGNYP LTRQFTGGLS
IGF
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