Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0273 |
Symbol | |
ID | 8724001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 356255 |
End bp | 358003 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | RagB/SusD domain protein |
Protein accession | YP_003385136 |
Protein GI | 284035206 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.13078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTTA AAAAACAAGT TCTCATTCTT GGCTCTACCG CAGCGATATC GCTGGTGGGA GTTGCCTGTA AGGATACCTT CCTGGAGGTG CCCGTAACGG GGCAATTGAG TGTTGCCCAG CTTAATACAA AAGCAGCCAT TGAAGGTTCG CTGGTTTCTG TTTATTCACT ACTTAATGGC CGGGGAGACC GAAATGCTTC GTTTGCCAAC TGGGTGTGGG GTGGCATACG GGGTGGCGAT GCCAATAAAG GCACCGACTT TGGCGATGGC ACGAACTTCG TACCTATACA GCGCTTCGAG ACTATTCCAA CGGGTGATGT GGCCGGTACA TGGGCCCGGA AATATGAAGG TATTTCACGC GCGAATTCAA CCCTGCGACT TTTGGCTACG GCTGGCTCCG ATGTATCTGC CGCCGACAAA ATCCGTATCA CTGCTGAAAC ACGTTTTCTG CGCGGCCTCT ACTACTTCGA TCTGAAGCGT CTCTATAACA TGGCCCCGTA TATTGATGAG ACGGTAGACT ATGGAACGGG AATTGAAAAA GTACCGAACA ACACGGACCT ATGGCCCAAA ATTGAAGCCG ATATTAAGTT TGCCTATGAA AACCTCCCCG AAACACAATC GGCGGTGGGC CGGGTAAATA AATGGGCTGC TGCCGCGCAA TTGGCCAAGA CGTATCTGTA TCAGAAAAAA TTCACAGATG CCAAAACATT ATTTGATCTT ATCATTGCCA ATGGCAAAAC GTCTAATGGT AAGAAATATG GCCTGGTAGC CAAATACGCC GACCTGTATA GAGCTACGAA TGACAATAAC GAAGAATCTG TATTCGCCAT TCAGGCGGCT GCAAATACCG GTAACGTCAA TAATGCTAAC CCGGAGTTCG ACCTGAACTA CCCATACAAC ACAGGACCGA ACGGCCCAGG AAACTGCTGC GGCTTCAACC AGCCAAGCTT CGAGTACGTA AACTCGTTCC GTACCGACGC CACTGGACTG CCTTTACTCG ATAACTCGTA TAACATCGGT GCTAACCAGG TGAAAAACGA TATGAATATT CTGAGTAAAG ACCCATTCAC GCCCGATGCA GGTAACCTCG ATCCCCGACT CGATCATGCT GTGGGTCGGC GTGGTATTCC ATACCTCGAC TGGCAGGACC ACCCAGGTGC CGACTGGATT CGTTTGCAAA CCAGTGGTGG CCCTTACTCA CCTAAAAAGT TCACCTACTA TAAGTCGGAC CGGGGTTCGC TGCAAGATAA TAGCTCATGG ACCCCAGGCT ATACCGCGCT TAACTTCCCT ATCATTCGTT ATGCCGACGT ATTGCTGATG GCGGCTGAAG CCGAAATTGA GGTAGGTTCG TTAGCGAAAG CACGGGATTA TGTAAACATG GTTCGGAAAC GGGCTGCTAA TCCAGACGGC TTTGTAAAAC GGGCTGATGG GACGCCAGCC GCTAACTACG TGATTTCGGA GTATCCAGCC TCGGTATTTG CTACAAAAGC ATCCGCTACA ACGGCTCTGC GATTCGAGCG TCGTTTAGAG TTAGGCGACG AAGGGCACCG TTTCTTCGAC CTCGTACGTT GGGGAGTTGC CGCACCCGTG CTGAACGCAT ACCTTCAATA TGAAGGCGCT TCGGCAAGGC TTCCAACAGC CCTGGGCGGA GCTAAATTTA CCGCTGGAAA AGATGAGTAC CTGCCTATCC CTCAGGCACA AATCGATATC CAGGGCAAAG ATGTTCTAAA GCAAAACCCC GGTTATTAA
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Protein sequence | MNLKKQVLIL GSTAAISLVG VACKDTFLEV PVTGQLSVAQ LNTKAAIEGS LVSVYSLLNG RGDRNASFAN WVWGGIRGGD ANKGTDFGDG TNFVPIQRFE TIPTGDVAGT WARKYEGISR ANSTLRLLAT AGSDVSAADK IRITAETRFL RGLYYFDLKR LYNMAPYIDE TVDYGTGIEK VPNNTDLWPK IEADIKFAYE NLPETQSAVG RVNKWAAAAQ LAKTYLYQKK FTDAKTLFDL IIANGKTSNG KKYGLVAKYA DLYRATNDNN EESVFAIQAA ANTGNVNNAN PEFDLNYPYN TGPNGPGNCC GFNQPSFEYV NSFRTDATGL PLLDNSYNIG ANQVKNDMNI LSKDPFTPDA GNLDPRLDHA VGRRGIPYLD WQDHPGADWI RLQTSGGPYS PKKFTYYKSD RGSLQDNSSW TPGYTALNFP IIRYADVLLM AAEAEIEVGS LAKARDYVNM VRKRAANPDG FVKRADGTPA ANYVISEYPA SVFATKASAT TALRFERRLE LGDEGHRFFD LVRWGVAAPV LNAYLQYEGA SARLPTALGG AKFTAGKDEY LPIPQAQIDI QGKDVLKQNP GY
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