Gene Slin_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0273 
Symbol 
ID8724001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp356255 
End bp358003 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content50% 
IMG OID 
ProductRagB/SusD domain protein 
Protein accessionYP_003385136 
Protein GI284035206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.13078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTA AAAAACAAGT TCTCATTCTT GGCTCTACCG CAGCGATATC GCTGGTGGGA 
GTTGCCTGTA AGGATACCTT CCTGGAGGTG CCCGTAACGG GGCAATTGAG TGTTGCCCAG
CTTAATACAA AAGCAGCCAT TGAAGGTTCG CTGGTTTCTG TTTATTCACT ACTTAATGGC
CGGGGAGACC GAAATGCTTC GTTTGCCAAC TGGGTGTGGG GTGGCATACG GGGTGGCGAT
GCCAATAAAG GCACCGACTT TGGCGATGGC ACGAACTTCG TACCTATACA GCGCTTCGAG
ACTATTCCAA CGGGTGATGT GGCCGGTACA TGGGCCCGGA AATATGAAGG TATTTCACGC
GCGAATTCAA CCCTGCGACT TTTGGCTACG GCTGGCTCCG ATGTATCTGC CGCCGACAAA
ATCCGTATCA CTGCTGAAAC ACGTTTTCTG CGCGGCCTCT ACTACTTCGA TCTGAAGCGT
CTCTATAACA TGGCCCCGTA TATTGATGAG ACGGTAGACT ATGGAACGGG AATTGAAAAA
GTACCGAACA ACACGGACCT ATGGCCCAAA ATTGAAGCCG ATATTAAGTT TGCCTATGAA
AACCTCCCCG AAACACAATC GGCGGTGGGC CGGGTAAATA AATGGGCTGC TGCCGCGCAA
TTGGCCAAGA CGTATCTGTA TCAGAAAAAA TTCACAGATG CCAAAACATT ATTTGATCTT
ATCATTGCCA ATGGCAAAAC GTCTAATGGT AAGAAATATG GCCTGGTAGC CAAATACGCC
GACCTGTATA GAGCTACGAA TGACAATAAC GAAGAATCTG TATTCGCCAT TCAGGCGGCT
GCAAATACCG GTAACGTCAA TAATGCTAAC CCGGAGTTCG ACCTGAACTA CCCATACAAC
ACAGGACCGA ACGGCCCAGG AAACTGCTGC GGCTTCAACC AGCCAAGCTT CGAGTACGTA
AACTCGTTCC GTACCGACGC CACTGGACTG CCTTTACTCG ATAACTCGTA TAACATCGGT
GCTAACCAGG TGAAAAACGA TATGAATATT CTGAGTAAAG ACCCATTCAC GCCCGATGCA
GGTAACCTCG ATCCCCGACT CGATCATGCT GTGGGTCGGC GTGGTATTCC ATACCTCGAC
TGGCAGGACC ACCCAGGTGC CGACTGGATT CGTTTGCAAA CCAGTGGTGG CCCTTACTCA
CCTAAAAAGT TCACCTACTA TAAGTCGGAC CGGGGTTCGC TGCAAGATAA TAGCTCATGG
ACCCCAGGCT ATACCGCGCT TAACTTCCCT ATCATTCGTT ATGCCGACGT ATTGCTGATG
GCGGCTGAAG CCGAAATTGA GGTAGGTTCG TTAGCGAAAG CACGGGATTA TGTAAACATG
GTTCGGAAAC GGGCTGCTAA TCCAGACGGC TTTGTAAAAC GGGCTGATGG GACGCCAGCC
GCTAACTACG TGATTTCGGA GTATCCAGCC TCGGTATTTG CTACAAAAGC ATCCGCTACA
ACGGCTCTGC GATTCGAGCG TCGTTTAGAG TTAGGCGACG AAGGGCACCG TTTCTTCGAC
CTCGTACGTT GGGGAGTTGC CGCACCCGTG CTGAACGCAT ACCTTCAATA TGAAGGCGCT
TCGGCAAGGC TTCCAACAGC CCTGGGCGGA GCTAAATTTA CCGCTGGAAA AGATGAGTAC
CTGCCTATCC CTCAGGCACA AATCGATATC CAGGGCAAAG ATGTTCTAAA GCAAAACCCC
GGTTATTAA
 
Protein sequence
MNLKKQVLIL GSTAAISLVG VACKDTFLEV PVTGQLSVAQ LNTKAAIEGS LVSVYSLLNG 
RGDRNASFAN WVWGGIRGGD ANKGTDFGDG TNFVPIQRFE TIPTGDVAGT WARKYEGISR
ANSTLRLLAT AGSDVSAADK IRITAETRFL RGLYYFDLKR LYNMAPYIDE TVDYGTGIEK
VPNNTDLWPK IEADIKFAYE NLPETQSAVG RVNKWAAAAQ LAKTYLYQKK FTDAKTLFDL
IIANGKTSNG KKYGLVAKYA DLYRATNDNN EESVFAIQAA ANTGNVNNAN PEFDLNYPYN
TGPNGPGNCC GFNQPSFEYV NSFRTDATGL PLLDNSYNIG ANQVKNDMNI LSKDPFTPDA
GNLDPRLDHA VGRRGIPYLD WQDHPGADWI RLQTSGGPYS PKKFTYYKSD RGSLQDNSSW
TPGYTALNFP IIRYADVLLM AAEAEIEVGS LAKARDYVNM VRKRAANPDG FVKRADGTPA
ANYVISEYPA SVFATKASAT TALRFERRLE LGDEGHRFFD LVRWGVAAPV LNAYLQYEGA
SARLPTALGG AKFTAGKDEY LPIPQAQIDI QGKDVLKQNP GY