Gene Slin_0266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0266 
Symbol 
ID8723994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp349681 
End bp350460 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385130 
Protein GI284035200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.420349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0704311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA AACCCCTGCT ATCCCTTTTT CTAATCTGCC TTTTGAGCTG GTCGGGTAGT 
GCATTAGCAC AGGGTAAGTA CGTGGTTGGA ACGGTAATTG ACCAGACAAC AAAAAGTGGC
GTTGATAAGG TAACCATTAT TAACCAGCGA ACCCGTCAGC GCGCCCGAAC CAATGCCTCA
GGGCGCTTCT TCCTGACTAT ACAGCCCGGC GATTCACTCA TTCTGACCAG TCAGCTATAT
AGCCGCACGG GTATTCGTTA CGATGGCTCA GACAACCCGA CCATCGTAGC CCGCGCCCTC
CCACCGATGC CGTACCGGGT AGTCGATCTG GCCGAGGTGA CTGTAAAGGG GAAACGCTAC
GAAGAAGTTA AACGCGAAAT TCAACAGGTA CTTGACGAGC CAACGGCTTC CAAAAAAGTC
ACCGGTGAGC AGGCTTTTGA TCGATTAGCC GATGGTGCCG GGGTAACGCT ACTGTATGAG
CTATTCGCCA AACGGCCTAA ATCTGATCGG AAAGCATATT ACATCATGCA GCAGGACCGT
CGGCACGCAC TGGCAGTGGA ACGGTTCCGG CTTCTGGTCG AGCAATCTAC GACCCTGAAA
CCCGATGAGG TAGACCGCTT TTATGACTTC TGCGATTTGG ACGATGAATT TCTGCTCAAA
GCCGAAGACT ACGACCTGAT CAATACCATC CAGCAATTAC GCAATCGGTA TGGCAAAGGC
TTCAACCGCC CCAGTCGCAT CTCTGCCGAC CCCGATGCAC CGGCACCGAA GCAGCCGTAA
 
Protein sequence
MPAKPLLSLF LICLLSWSGS ALAQGKYVVG TVIDQTTKSG VDKVTIINQR TRQRARTNAS 
GRFFLTIQPG DSLILTSQLY SRTGIRYDGS DNPTIVARAL PPMPYRVVDL AEVTVKGKRY
EEVKREIQQV LDEPTASKKV TGEQAFDRLA DGAGVTLLYE LFAKRPKSDR KAYYIMQQDR
RHALAVERFR LLVEQSTTLK PDEVDRFYDF CDLDDEFLLK AEDYDLINTI QQLRNRYGKG
FNRPSRISAD PDAPAPKQP