Gene Slin_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0255 
Symbol 
ID8723983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp335367 
End bp335864 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content46% 
IMG OID 
Productprotein of unknown function DUF820 
Protein accessionYP_003385119 
Protein GI284035189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00911241 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGCGG TTGCAGTAGC AGAACAGGCA GTTGAGGAGG TGGTCCGCTC ACAGTATGAA 
CTTGAGCGCG GTAAGCCTGT GCCTAGTAAA AATCATTCGC GGCTTCAACA GAGAATAGGT
GTTGAATTAG CTATCCATTA TGGTGATCAA TATGATACCT ATAGCGAACT ATCGCTCGAA
GCACCTAATC CGTCAATGGT GCCAGACTTA TGTTTGTTCC CGGTCGAACC CTCCAACTGG
CGTGAGGATG AAGTTCGCGT GAGTGCTGTG CCATTGACCG TTATTGAAAT CGTTTCCCCT
TCTCAAACAG ATACCGAACT GACCGAGAAG TCGAAAGCGT ATTTTGCGGC TGGTGTAAAA
TCATACTGGT TGGTGCAGCC TGTTTTGCGG ACAGTTTTTG TGTTACTGCC TAATGGTGAC
GAACTGGTTT TTCACAACGA TATGCTGACA GACCCAACAA ATGGTGTTTC AATTGATTTG
AAGAAAGTAT TTCGGTAA
 
Protein sequence
MEAVAVAEQA VEEVVRSQYE LERGKPVPSK NHSRLQQRIG VELAIHYGDQ YDTYSELSLE 
APNPSMVPDL CLFPVEPSNW REDEVRVSAV PLTVIEIVSP SQTDTELTEK SKAYFAAGVK
SYWLVQPVLR TVFVLLPNGD ELVFHNDMLT DPTNGVSIDL KKVFR