| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0253 |
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| Symbol | |
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| ID | 8723981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 333168 |
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| End bp | 333941 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003385117 |
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| Protein GI | 284035187 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.010369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATC TTGGTATGGC CGAAGCCGCC AAACGTGTAA AAGCCGCCGG ATACGACGGT
ATGGAAATCT CGGCCGGACA AGATAAACGA AATGAAGCGG TCCAGATTAC GCACGATCAC
GGCCTGGAAT TAATCCTGAT GGCCTTTGGC GGTGGCAGTA ACTTCAGCGA ACACAAAAAG
AAATACCAGG ACGACCTGCT GGACATTGCG CGGTACAAGC CCCTGTTCAT CAACGCCCAT
ACCGGCCACG ATTATTTTAC ATTTGAGCAG AACGTGGAGT TGATTCAGAT AGCCATCGCT
GTGGAGAAGC AAACGGGCGT CCGGATTCTG CACGAAACGC ACCGGGGCCG GTTTTCATAT
AGCGCTCCGG CCATTCAGTC CTACCTACTC AAAGTTCCGG AGTTACGCCT GACCGCCGAT
TACTCGCACT GGGTAAACGT GGCCGAATCC TATCTATCCG ACCAGATGGA AAACGTGAAC
CGGGCCATTA CGGTTAGTGA CCATATCCAT TGCCGAGTTG GCCACCCCGA AGGGCCACAG
GTGAACGATC CGCGTGCACC AGAGTGGAAA GATGCCCTCG AAAGTCATGC CAAATGGTGG
GATGCCATTC GGGACAGATT TCAGAAGGCA AACGCACCCA CCCTGACTGT TACCTGCGAA
TTTGGTCCGG CGGGATATTT GCCAACCATT CCCTTCACCC AGCAACCGGT TGCCAGCCAG
TGGGATATAA ACGTATTTAT GAAAGATTAC CTAAAAAAAC GCTGGGCGGT CTGA
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| Protein sequence | MENLGMAEAA KRVKAAGYDG MEISAGQDKR NEAVQITHDH GLELILMAFG GGSNFSEHKK
KYQDDLLDIA RYKPLFINAH TGHDYFTFEQ NVELIQIAIA VEKQTGVRIL HETHRGRFSY
SAPAIQSYLL KVPELRLTAD YSHWVNVAES YLSDQMENVN RAITVSDHIH CRVGHPEGPQ
VNDPRAPEWK DALESHAKWW DAIRDRFQKA NAPTLTVTCE FGPAGYLPTI PFTQQPVASQ
WDINVFMKDY LKKRWAV
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