| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0250 |
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| Symbol | |
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| ID | 8723978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 328572 |
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| End bp | 330503 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003385114 |
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| Protein GI | 284035184 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.173354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00154512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCCGACG AACCCCTTGC TCACGTTGAA GAACCTAAAG CGGCAGCTGC GGTTGCAGAA
GTAGTAACGC CTAAGGCTGA TCCTAATCAG CTTTTATTCT CCAGCCTGGC CATTTCGCCC
GAGCTGTTGC AGGCTGTTAC GGATATGGGC TTCATTAGCC CATCGCCCAT TCAGGCCGAA
GCAATTCCAC CAATTCTGGA TGGTCGTGAC GTAATCGGAC AGGCCCAAAC GGGTACCGGT
AAAACGGCCG CCTTTGGTAT TCCTGCTCTT GATCTGATCG ATGTTCAGGA TCGTTCGGTA
CAAACGCTTA TCCTTTGCCC AACGCGGGAA CTGGCCTTGC AGGTAGCCGA AGAGATAAAG
AAACTAGCCA AATACAAGCG TGGTATCCGT ATCGAAGCTA TCTATGGCGG TGACTCCATT
GAGCGGCAGA TTCGGTCACT CAAGAGCGGT GTGCATATCG TAATCGGTAC GCCCGGCCGT
GTAATGGACC ACATGGAGCG AAATACCCTC AAACTCAACA ACGTTAAGAT GATGATTCTT
GACGAAGCGG ATGAGATGCT GGATATGGGC TTCCGGGAAG ATATTGAGAG CATTCTGGAA
GAAATGCCCG AAGAGCGGCA AACGATCCTG TTCTCGGCAA CGATGTCGAA GCCGATCATG
CAGATCACCC AGAAGTTCCA GAAAGATCCT GTGCTGGTGA AAGTCGTCAA GAAAGAATTG
ACGAACGTAA ACATCGAGCA GGTTTATTTT GAAGTAAAAT CGAAAGCAAA AGTTGAAGTG
ATGTGCCGTC TGATCGACAT GTACGATCTG AAACTGCTGC TGGTATTCTG TAATACAAAA
CGGAAAGTCG ACGAAATCGT TGAAGACCTG CAAATCCGGG GCTATCAGGC CGAAGGCTTG
CACGGCGATC TGCGCCAGGC GCAACGGAAC AATGTCATGA GCAAGTTCCG CGCCGGTACG
ACCAACATCC TGGTTGCTAC CGACGTAGCC GCTCGTGGTA TTGACGTTGA TGATGTCGAC
GCGGTTATCA ACTTCGACAT TCCCCTCGAC GAAGAATATT ACGTACACCG GATTGGTCGG
ACAGGCCGGG CGGGTAAATC GGGCCGGGCG TTCTCGTTCG TGGGTCGCGA TGAGAAATAC
CGTTTCCGCG AAATCCAGAC TTATACAAAA GTTAAGGTTG AGAAAGGTGT CATTCCTTCC
TTCGAAGACA TCGTTGGTGT TCGCAAAGCC CGTTTCATCG AGCAACTGCA ACAAACGATT
CAGGAAAGCA AAGACTTGAA CCTGTATGAC GATTTACTGA CGCAGCTCAA CCACGCCGGT
TTCTCGACCG AGCAGATTGT AGCCGCGCTG GTAAAACGCA GTATGGGTCT GGAGAAGAAC
GAATTCGCCG ATCAGAACCT CAATCTGGAA GATGATCGCC GGAATGGCCG CGACAAATAC
GCCGATCGTG GTCGGGGTGA AGGTGGTGGA CGCTTCGAAG ATCGTCGGGG TGGGTCACGC
TTTGGCGACC GCGATGAGCG GGGTAACAGC TCGCGTTTTG GTGACCGTCG TGAGGGTGGT
GATCGGGGTG GGTCACGCTT TGGCGACCGT CGCTCCGACG GTGGTGATCG TCCACGTTTC
AACGACCGGG ATCGGTCGGG CACAGGCAAA CCTTATTTCG ACCGCGACGA TCAGCGTGTT
CCCCGTGAAC GCGAAGCGAA CATGACCCGC CTGATGGTGA GCATTGGCCG CAAAGATTTC
GTCCGTCCGG GCGACATCGT AGGTGCCATT GCCGGTGAAG CCAACATTCC CGGTAACAGC
ATCGGTAGCA TTGATATCTT CGACAAGTTC ACCTACGTTG ATGTACCGAA AGATGTAGCC
AACCGCGTTG TCGACGCTAT GGAAGGCAAC ACCATTAAAG GACGCCGGGT TAATATTGAA
GTAGCACGGT AG
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| Protein sequence | MADEPLAHVE EPKAAAAVAE VVTPKADPNQ LLFSSLAISP ELLQAVTDMG FISPSPIQAE
AIPPILDGRD VIGQAQTGTG KTAAFGIPAL DLIDVQDRSV QTLILCPTRE LALQVAEEIK
KLAKYKRGIR IEAIYGGDSI ERQIRSLKSG VHIVIGTPGR VMDHMERNTL KLNNVKMMIL
DEADEMLDMG FREDIESILE EMPEERQTIL FSATMSKPIM QITQKFQKDP VLVKVVKKEL
TNVNIEQVYF EVKSKAKVEV MCRLIDMYDL KLLLVFCNTK RKVDEIVEDL QIRGYQAEGL
HGDLRQAQRN NVMSKFRAGT TNILVATDVA ARGIDVDDVD AVINFDIPLD EEYYVHRIGR
TGRAGKSGRA FSFVGRDEKY RFREIQTYTK VKVEKGVIPS FEDIVGVRKA RFIEQLQQTI
QESKDLNLYD DLLTQLNHAG FSTEQIVAAL VKRSMGLEKN EFADQNLNLE DDRRNGRDKY
ADRGRGEGGG RFEDRRGGSR FGDRDERGNS SRFGDRREGG DRGGSRFGDR RSDGGDRPRF
NDRDRSGTGK PYFDRDDQRV PREREANMTR LMVSIGRKDF VRPGDIVGAI AGEANIPGNS
IGSIDIFDKF TYVDVPKDVA NRVVDAMEGN TIKGRRVNIE VAR
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